CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Cb02052
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Cb02052
T023814_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb02052.1.p
B3
37
150
FEKPLTPSDVGKLNRLVIPKQHAERYFPLGSAGGVGGGDGSEKGLLLAFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKRLDAGDVVCFERVRGGLGVGDRLFIGCRRRG
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
270 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshMC_pg.C_10568
Mucor circinelloides
estExt_fgeneshMC_pg.C_10568
I
gw1.1.1257.1
Mucor circinelloides
gw1.1.1257.1
I
PHACADRAFT_73403
Phanerochaete carnosa
PHACADRAFT_73403
N
gw1.25.121.1
Phycomyces blakesleeanus
gw1.25.121.1
I
gw1.73.24.1
Phycomyces blakesleeanus
gw1.73.24.1
I
GLOINDRAFT_221110
Rhizophagus irregularis
GLOINDRAFT_221110
I
GLOINDRAFT_24118
Rhizophagus irregularis
GLOINDRAFT_24118
I
GLOINDRAFT_58638
Rhizophagus irregularis
GLOINDRAFT_58638
I
RO3G_01826
Rhizopus oryzae
RO3G_01826
I