CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Da02396
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Da02396
T023819_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Da02396.1.p
B3
62
156
FTTVMSKSHVQKQFQLVIPARLHRHLPAARVPAVLLCRGRSWAASYCGDLKCKKIDTAAWRDFALDNALRVGDACVFELIAGTSAGSEVVFRVQV
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KNAG_0D00690
Kazachstania naganishii
KNAG_0D00690
I
KUCA_T00003059001
Kuraishia capsulata
KUCA_T00003059001
N
SAKL0A02860g
Lachancea kluyveri
SAKL0A02860g
I
NCAS_0G01100
Naumovozyma castellii
NCAS_0G01100
I
NCAS_0D04190
Naumovozyma castellii
NCAS_0D04190
I
NDAI_0F01220
Naumovozyma dairenensis
NDAI_0F01220
I
NDAI_0I00740
Naumovozyma dairenensis
NDAI_0I00740
I
SU7_3455
Saccharomyces arboricola
SU7_3455
I
24374_YPL248C
Saccharomyces bayanus
24374_YPL248C
I
Scas_Contig699.7
Saccharomyces castellii
Scas_Contig699.7
I
Scas_Contig720.58
Saccharomyces castellii
Scas_Contig720.58
I
GAL4
Saccharomyces cerevisiae
YPL248C
D
SKUD_900401
Saccharomyces kudriavzevii
SKUD_900401
I
21336_YPL248C
Saccharomyces mikatae
21336_YPL248C
I
21920_YPL248C
Saccharomyces paradoxus
21920_YPL248C
I
TBLA_0G01800
Tetrapisispora blattae
TBLA_0G01800
I
TPHA_0H01980
Tetrapisispora phaffii
TPHA_0H01980
I