CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J27608
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.J27608
T023981_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J27608.1.p
B3
92
189
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAGEAARDRR
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
281 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000013478
Ailuropoda melanoleuca
ENSAMEG00000013478
I
ENSBTAP00000019345-D1
Bos grunniens
ENSBTAP00000019345-D1
I
SNAI1
Bos taurus
ENSBTAG00000014554
I
SNAI1
Callithrix jacchus
ENSCJAG00000000518
I
SNAI1
Canis familiaris
ENSCAFG00000011499
I
SNAI1
Cavia porcellus
ENSCPOG00000026663
I
ENSCSAG00000015065
Chlorocebus sabaeus
ENSCSAG00000015065
I
SNAI1
Dasypus novemcinctus
ENSDNOG00000023834
I
GM16048
Drosophila sechellia
FBgn0170964
I
ENSETEG00000016371
Echinops telfairi
ENSETEG00000016371
I
SNAI1
Equus caballus
ENSECAG00000009787
I
SNAI1
Felis catus
ENSFCAG00000010558
I
SNAI1
Gorilla gorilla
ENSGGOG00000024422
I
SNAI1
Homo sapiens
ENSG00000124216
D
ENSSTOG00000005866
Ictidomys tridecemlineatus
ENSSTOG00000005866
I
SNAI1
Loxodonta africana
ENSLAFG00000030265
I
ENSMMUG00000019719
Macaca mulatta
ENSMMUG00000019719
I
ENSMICG00000011160
Microcebus murinus
ENSMICG00000011160
I
ENSMPUG00000017558
Mustela putorius furo
ENSMPUG00000017558
I
Snai1
Mus musculus
ENSMUSG00000042821
D
Myotis_brandtii_SNAI1_10026379
Myotis brandtii
Myotis_brandtii_SNAI1_10026379
I
ENSMLUG00000015053
Myotis lucifugus
ENSMLUG00000015053
I
ENSNLEG00000006985
Nomascus leucogenys
ENSNLEG00000006985
I
SNAI1
Otolemur garnettii
ENSOGAG00000030111
I
ENSOARG00000013174
Ovis aries
ENSOARG00000013174
I
SNAI1
Pan troglodytes
ENSPTRG00000013614
I
ENSPANG00000007536
Papio anubis
ENSPANG00000007536
I
SNAI1
Procavia capensis
ENSPCAG00000011934
I
SNAI1
Pteropus vampyrus
ENSPVAG00000004119
I
Snai1
Rattus norvegicus
ENSRNOG00000009594
I
SNAI1
Tupaia belangeri
ENSTBEG00000012262
I
SNAI1
Tursiops truncatus
ENSTTRG00000002029
I