CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra010720
(
Brassica rapa
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Bra010720
T024543_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra010720.1-P
BBR
1
285
MESGGQYDNGRYKPDYYKGTPPSVWNMMPQHQIKEQHNALVMNKKIMSILAERDAALKERNEALAAKKEALAARDEALEQRDKALSERDNAIMERETALNALHYPEKNNLNYILSCAKRGGTEGRSHPPRPPPVSPIPADKNPTKRKKETKQGKKVGDDLNRLAASPGKKCRKDWDVNEVGLNLVAFDETTMPVPMCTCTGTARQCYKWGSGGWQSSCCTTTLSQHPLPQMPNKRHSRMGGRKMSGNVFSRLLSRLAGEGQDLSSPVDLKDYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Brassica rapa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_200704.1
Arabidopsis lyrata
scaffold_200704.1
I
0.818
BPC5
Arabidopsis thaliana
AT4G38910
D
0.719
Bostr.25542s0071
Boechera stricta
Bostr.25542s0071
I
0.730
Bo1g002230
Brassica oleracea
Bo1g002230
N
0.734
Bo3g149650
Brassica oleracea
Bo3g149650
N
0.875
Bo7g119540
Brassica oleracea
Bo7g119540
I
0.700
Bra033583
Brassica rapa
Bra033583
N
0.739
Thhalv10025867m.g
Eutrema salsugineum
Thhalv10025867m.g
I
0.741
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000