CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra033583
(
Brassica rapa
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Bra033583
T024552_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra033583.1-P
BBR
1
262
MMPQHQIKEQHNALVMNKKIMSILAERDAAVKERNEALAAKQEALAARDEALQQRDLAISERDNAIMERENALTALQHRENHLNYILDCAKRGGYQTCFTEETHLPNPSPLSTIPHEPPNTKRKKDRKRKKAGGEDLNRQLASPGKKCRKDWDCNDVGLNLVTFDETTMPVPMCTCTGTARQCYKWGNGGGQSSCCTTTLSQYPLPQMPNKRHSRIGGRKMSGNVFSRLLSRLAGEGHDLSSPVDLKDYWARHGTNRYIIIK
Links
Other
BBR
family TFs
Other
Brassica rapa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.25542s0071
Boechera stricta
Bostr.25542s0071
I
0.732
Bo1g002230
Brassica oleracea
Bo1g002230
N
0.708
Bo7g119540
Brassica oleracea
Bo7g119540
I
0.798
Bra010720
Brassica rapa
Bra010720
N
0.739
Thhalv10025867m.g
Eutrema salsugineum
Thhalv10025867m.g
I
0.743
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000