CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA05G38430
(
Glycine max
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
GLYMA05G38430
T024610_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA05G38430.2
BBR
1
317
MDDGRQHENGRHKMEYYRGAHSLWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILEIELEAAISEKNEALAARDAAIRQRDEALAQRDNALLERDNALAALQSRNNSVNFPFGGGIQCGSKRMHHSSNHLSNMTEAAYNTKDMIIRDASPVTVIPSEAVNSHQSKRSKENKVINSKASKPPCKVKKMGEDLNRQASSEGTKIRSEWDRQDVGVNLVAFDETIMLVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVSEGHDLSIPLDLKEYWARHGTNRYITIK
GLYMA05G38430.4
BBR
1
317
MDDGRQHENGRHKMEYYRGAHSLWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILEIELEAAISEKNEALAARDAAIRQRDEALAQRDNALLERDNALAALQSRNNSVNFPFGGGIQCGSKRMHHSSNHLSNMTEAAYNTKDMIIRDASPVTVIPSEAVNSHQSKRSKENKVINSKASKPPCKVKKMGEDLNRQASSEGTKIRSEWDRQDVGVNLVAFDETIMLVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVSEGHDLSIPLDLKEYWARHGTNRYITIK
GLYMA05G38430.5
BBR
1
317
MDDGRQHENGRHKMEYYRGAHSLWNTDSQHQVKEPNALVMNKKIRSIMAERQAAILEIELEAAISEKNEALAARDAAIRQRDEALAQRDNALLERDNALAALQSRNNSVNFPFGGGIQCGSKRMHHSSNHLSNMTEAAYNTKDMIIRDASPVTVIPSEAVNSHQSKRSKENKVINSKASKPPCKVKKMGEDLNRQASSEGTKIRSEWDRQDVGVNLVAFDETIMLVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVSEGHDLSIPLDLKEYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Glycine max
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00185p00053620
Amborella trichopoda
AMTR_s00185p00053620
I
0.798
scaffold_200704.1
Arabidopsis lyrata
scaffold_200704.1
I
0.745
Bo3g149640
Brassica oleracea
Bo3g149640
I
0.787
PK01854.1
Cannabis sativa
PK01854.1
N
0.707
evm.TU.supercontig_150.9
Carica papaya
evm.TU.supercontig_150.9
N
0.711
Ca_05693
Cicer arietinum
Ca_05693
N
0.862
GLYMA08G01240
Glycine max
GLYMA08G01240
N
0.960
chr4.CM0175.470.nc
Lotus japonicus
chr4.CM0175.470.nc
N
0.847
MDP0000517554
Malus domestica
MDP0000517554
N
0.707
MDP0000802164
Malus domestica
MDP0000802164
N
0.707
MTR_8g099780
Medicago truncatula
MTR_8g099780
N
0.825
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
Pm021667
Prunus mume
Pm021667
N
0.736
PRUPE_ppa008471mg
Prunus persica
PRUPE_ppa008471mg
N
0.733