CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa008471mg
(
Prunus persica
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
PRUPE_ppa008471mg
T024724_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ02465
BBR
1
311
MDDGRQHENGRHKMDYYRGAASPWNMATQQQAKEPNALVMNKKIMSIIAERDAAIRERNAALTEKNEALAARDEALRQRDEALAQRDTAMMERDNAFAALHMRDNAVNFPLGGGVQRGAKRLHHPSNHSVTLAEAHYSTKDMHITDAFPISVISAEAVKSRQTKRAKENKASRASKPSRKKVGEDLNRQASSDGIKYKSEWDTHDLGLNLVSFDESTMPVPVCSCTGVPRQCYKWGNGGWQSSCCTTHMSMYPLPQMPNKRHARMGGRKMSGSVFTRLLSRLAADGHDLSIPLDLKEYWARHGTNRYITIK
EMJ02466
BBR
20
330
MDDGRQHENGRHKMDYYRGAASPWNMATQQQAKEPNALVMNKKIMSIIAERDAAIRERNAALTEKNEALAARDEALRQRDEALAQRDTAMMERDNAFAALHMRDNAVNFPLGGGVQRGAKRLHHPSNHSVTLAEAHYSTKDMHITDAFPISVISAEAVKSRQTKRAKENKASRASKPSRKKVGEDLNRQASSDGIKYKSEWDTHDLGLNLVSFDESTMPVPVCSCTGVPRQCYKWGNGGWQSSCCTTHMSMYPLPQMPNKRHARMGGRKMSGSVFTRLLSRLAADGHDLSIPLDLKEYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Prunus persica
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
Pm021667
Prunus mume
Pm021667
N
0.996
MDP0000517554
Malus domestica
MDP0000517554
N
0.901
MDP0000802164
Malus domestica
MDP0000802164
N
0.901
MDP0000236732
Malus domestica
MDP0000236732
N
0.886
gene01678-v1.0-hybrid
Fragaria vesca
gene01678-v1.0-hybrid
N
0.868
scaffold_200704.1
Arabidopsis lyrata
scaffold_200704.1
I
0.764
PK01854.1
Cannabis sativa
PK01854.1
N
0.755
Cla016126
Citrullus lanatus
Cla016126
N
0.740
Cucsa.382200
Cucumis sativus
Cucsa.382200
N
0.736
GLYMA05G38430
Glycine max
GLYMA05G38430
N
0.733
GLYMA08G01240
Glycine max
GLYMA08G01240
N
0.729
evm.TU.supercontig_150.9
Carica papaya
evm.TU.supercontig_150.9
N
0.718
Ca_05693
Cicer arietinum
Ca_05693
N
0.703