CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene01678-v1.0-hybrid
(
Fragaria vesca
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
gene01678-v1.0-hybrid
T024854_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna01678.1-v1.0-hybrid
BBR
1
310
MDDGRHENGRHKPDYYRGAPSPWNMTAQQQVKEPNALVMNKKIMSIIAERDAAIRERNAAISEKNEALAARDEALRQRDEAFSQRDTALMERDNAFAAFHIRDNSMNFPLGGGAQRGSKRMHYPSHHPVNMADGPYSTKDVPITEAFPISVLSAEAIKSRQTKRSKQNKASRASKPSRKKVGEDLNRQASTDGIKYRSEWDTQDLGLNLVSFDETTMPVPVCSCTGMPRQCYKWGNGGWQSSCCTTNMSMYPLPQMPNKRHARMGGRKMSGSVFTRLLSRLAAEGHDLSVPLDLKEYWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Fragaria vesca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
Pm021667
Prunus mume
Pm021667
N
0.872
PRUPE_ppa008471mg
Prunus persica
PRUPE_ppa008471mg
N
0.868
MDP0000517554
Malus domestica
MDP0000517554
N
0.828
MDP0000802164
Malus domestica
MDP0000802164
N
0.828
MDP0000236732
Malus domestica
MDP0000236732
N
0.799
PK01854.1
Cannabis sativa
PK01854.1
N
0.744
Cla016126
Citrullus lanatus
Cla016126
N
0.718
Cucsa.382200
Cucumis sativus
Cucsa.382200
N
0.707
GLYMA08G01240
Glycine max
GLYMA08G01240
N
0.703