POPTR_0012s03740 (Populus trichocarpa)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 POPTR_0012s03740 T024716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s03740.1 BBR 1 283

Links

Other BBR family TFs
Other Populus trichocarpa TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_42450 Aegilops tauschii F775_42450 I
F775_01070 Aegilops tauschii F775_01070 I
AMTR_s00022p00165560 Amborella trichopoda AMTR_s00022p00165560 I
GIS2 Arabidopsis lyrata fgenesh2_kg.6__609__AT5G06650.1 I
ZFP5 Arabidopsis thaliana AT1G10480 D
GIS2 Arabidopsis thaliana AT5G06650 I
Bostr.13129s0308 Boechera stricta Bostr.13129s0308 I
Bostr.2902s0137 Boechera stricta Bostr.2902s0137 I
BRADI4G30920 Brachypodium distachyon BRADI4G30920 I
Bo9g166240 Brassica oleracea Bo9g166240 I
Bo2g007320 Brassica oleracea Bo2g007320 I
Bo8g109510 Brassica oleracea Bo8g109510 I
Bra008787 Brassica rapa Bra008787 I
Bra028724 Brassica rapa Bra028724 I
Cagra.1504s0017 Capsella grandiflora Cagra.1504s0017 I
Cagra.3166s0007 Capsella grandiflora Cagra.3166s0007 I
Carubv10018785m.g Capsella rubella Carubv10018785m.g I
Carubv10003820m.g Capsella rubella Carubv10003820m.g I
Carubv10003685m.g Capsella rubella Carubv10003685m.g I
Carubv10002570m.g Capsella rubella Carubv10002570m.g I
evm.TU.supercontig_116.88 Carica papaya evm.TU.supercontig_116.88 I
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I
Ca_08116 Cicer arietinum Ca_08116 I
Ciclev10003844m.g Citrus clementina Ciclev10003844m.g I
orange1.1g046965m.g Citrus sinensis orange1.1g046965m.g I
Thhalv10015891m.g Eutrema salsugineum Thhalv10015891m.g I
GLYMA06G14783 Glycine max GLYMA06G14783 I
LPERR08G07840 Leersia perrieri LPERR08G07840 I
Lus10017229.g Linum usitatissimum Lus10017229.g I
cassava44297.m1 Manihot esculenta cassava44297.m1 I
MTR_1g077700 Medicago truncatula MTR_1g077700 N
BGIOSGA029710 Oryza indica BGIOSGA029710 I
Pavir.Ha01090 Panicum virgatum Pavir.Ha01090 I
Pavir.Ia03263 Panicum virgatum Pavir.Ia03263 I
Pavir.Ib01788 Panicum virgatum Pavir.Ib01788 I
Pavir.Ib01877 Panicum virgatum Pavir.Ib01877 I
30045.m000471 Ricinus communis 30045.m000471 I
Si028367m.g Setaria italica Si028367m.g I
Solyc10g078970.1 Solanum lycopersicum Solyc10g078970.1 I
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I
Sb01g034110 Sorghum bicolor Sb01g034110 I
TCM_044725 Theobroma cacao TCM_044725 I
TRIUR3_34498 Triticum urartu TRIUR3_34498 I
VIT_08s0040g00750 Vitis vinifera VIT_08s0040g00750 I
GRMZM2G703281 Zea mays GRMZM2G703281 I
GRMZM2G403590 Zea mays GRMZM2G403590 I
GRMZM2G115388 Zea mays GRMZM2G115388 I