30170.m014145 (Ricinus communis)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 30170.m014145 T024791_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.751 0.751
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30170.m014145 BBR 1 339

Links

Other BBR family TFs
Other Ricinus communis TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FRS1 Arabidopsis thaliana AT4G19990 N
Bostr.30275s0471 Boechera stricta Bostr.30275s0471 N
Cagra.2564s0022 Capsella grandiflora Cagra.2564s0022 N
Carubv10004190m.g Capsella rubella Carubv10004190m.g N
Cucsa.134500 Cucumis sativus Cucsa.134500 N
Eucgr.D00033 Eucalyptus grandis Eucgr.D00033 N
Thhalv10024475m.g Eutrema salsugineum Thhalv10024475m.g N
gene19997-v1.0-hybrid Fragaria vesca gene19997-v1.0-hybrid N
Gorai.002G163900 Gossypium raimondii Gorai.002G163900 N
MDP0000236134 Malus domestica MDP0000236134 N
FRS1 Populus trichocarpa POPTR_0003s10970 N
PRUPE_ppa001166mg Prunus persica PRUPE_ppa001166mg N
SapurV1A.0325s0180 Salix purpurea SapurV1A.0325s0180 N
Solyc02g068550.1 Solanum lycopersicum Solyc02g068550.1 N
TCM_006022 Theobroma cacao TCM_006022 N
FRS1 Vitis vinifera VIT_01s0011g01470 N