CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava37681.valid.m1
(
Manihot esculenta
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
cassava37681.valid.m1
T024796_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava37681.valid.m1
BBR
12
242
GTYSNRSHIIPEASTGTSVPHFAWFYSGNFYSPPKTSSVHSQGTQIDSEPGLPVDPIRSVAPTTEPAKKNNSGTKPAKARKQKPSVKGSNQISSKISKPKQPKKASSKKNGQNMPEAKREKRNLNVDVDRMNFDLSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTITISEYPLPMSSARPGARMAGRKMSSGAYVKLLLKLAAEGHDLSHPVDLKDHWARHGTNKFVIIK
Links
Other
BBR
family TFs
Other
Manihot esculenta
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0003s01170
Populus trichocarpa
POPTR_0003s01170
N
POPTR_0003s01190
Populus trichocarpa
POPTR_0003s01190
N
POPTR_0003s01200
Populus trichocarpa
POPTR_0003s01200
N
POPTR_0003s01240
Populus trichocarpa
POPTR_0003s01240
N
POPTR_0074s00200
Populus trichocarpa
POPTR_0074s00200
N
SapurV1A.0310s0190
Salix purpurea
SapurV1A.0310s0190
N
SapurV1A.0310s0210
Salix purpurea
SapurV1A.0310s0210
N
SapurV1A.0310s0230
Salix purpurea
SapurV1A.0310s0230
N
SapurV1A.0647s0100
Salix purpurea
SapurV1A.0647s0100
N
SapurV1A.0893s0110
Salix purpurea
SapurV1A.0893s0110
N
SapurV1A.3003s0030
Salix purpurea
SapurV1A.3003s0030
N
SapurV1A.3015s0020
Salix purpurea
SapurV1A.3015s0020
N
SapurV1A.3015s0030
Salix purpurea
SapurV1A.3015s0030
N