CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Aquca_006_00158
(
Aquilegia coerulea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Aquca_006_00158
T024819_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_006_00158.1
BBR
1
343
MDDSGQRENGRHKPDQYKSLHSQWMIPPHLMKDHHAMTMKFMSILAERDAAIQERNLAVSEKKAALVERDMAIMQREAAIAERNNALMERDNAIAALEYRDSATVNGSTASTCQPGCGIPCGTKHMHHHQHVHHPSHLNEAPYNSRDINISDAFPISAAASEAVKPRRAKRTKDAKALQSKKAFKLSKKGKRGNDDTNRQVPFAKPLEWKSEQCMGGGGEDMSKQLAVSKPDWIGQDLGLNQVPFDDSAMPVPGCSCTGVLQQCYKWGKGGWQSACCTTTLSMYPLPVMPNKRHARLGGRKMSGSAFSKLLSRLASEGHDLSTPLDLKDHWARHGTNRYITIK
Links
Other
BBR
family TFs
Other
Aquilegia coerulea
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK17289.1
Cannabis sativa
PK17289.1
N
PK03582.1
Cannabis sativa
PK03582.1
N
evm.TU.supercontig_167.13
Carica papaya
evm.TU.supercontig_167.13
N
Cucsa.310210
Cucumis sativus
Cucsa.310210
N
Cucsa.096040
Cucumis sativus
Cucsa.096040
N
Eucgr.J03076
Eucalyptus grandis
Eucgr.J03076
N
Eucgr.J03074
Eucalyptus grandis
Eucgr.J03074
N
gene15716-v1.0-hybrid
Fragaria vesca
gene15716-v1.0-hybrid
N
gene11611-v1.0-hybrid
Fragaria vesca
gene11611-v1.0-hybrid
N
GLYMA20G02970
Glycine max
GLYMA20G02970
N
GLYMA15G00440
Glycine max
GLYMA15G00440
N
Gorai.010G116000
Gossypium raimondii
Gorai.010G116000
N
Gorai.009G127000
Gossypium raimondii
Gorai.009G127000
N
MDP0000190656
Malus domestica
MDP0000190656
N
cassava11133.m1
Manihot esculenta
cassava11133.m1
N
cassava10866.m1
Manihot esculenta
cassava10866.m1
N
mgf009738m
Mimulus guttatus
mgf009738m
N
mgf003540m
Mimulus guttatus
mgf003540m
N
POPTR_0006s27240
Populus trichocarpa
POPTR_0006s27240
N
POPTR_0001s20880
Populus trichocarpa
POPTR_0001s20880
N
Pm004638
Prunus mume
Pm004638
N
PRUPE_ppa002486mg
Prunus persica
PRUPE_ppa002486mg
N
PRUPE_ppa002480mg
Prunus persica
PRUPE_ppa002480mg
N
29841.m002892
Ricinus communis
29841.m002892
N
SapurV1A.0043s0920
Salix purpurea
SapurV1A.0043s0920
N
SapurV1A.0344s0260
Salix purpurea
SapurV1A.0344s0260
N
TCM_036972
Theobroma cacao
TCM_036972
N
TCM_027270
Theobroma cacao
TCM_027270
N