CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb10g012510
(
Sorghum bicolor
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Sb10g012510
T027628_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb10g012510.1
BED ZF
27
76
DPAWKHCMMPDVTKKNSLKCNYCGNIYNGGITRMKYHLGKVPKFVVAKCN
Links
Other
BED ZF
family TFs
Other
Sorghum bicolor
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG016667.1
Alligator sinensis
Alligator_sinensis_CCG016667.1
N
ENSAPLG00000014876
Anas platyrhynchos
ENSAPLG00000014876
N
TRERF1
Anolis carolinensis
ENSACAG00000001080
N
ENSBTAP00000020376-D1
Bos grunniens
ENSBTAP00000020376-D1
N
TRERF1
Bos taurus
ENSBTAG00000015321
N
TRERF1
Callithrix jacchus
ENSCJAG00000004347
N
Aan_R011464
Calypte anna
Aan_R011464
N
TRERF1
Canis familiaris
ENSCAFG00000001642
N
TRERF1
Cavia porcellus
ENSCPOG00000015717
N
Cmyd_10010458
Chelonia mydas
Cmyd_10010458
N
TRERF1
Choloepus hoffmanni
ENSCHOG00000006120
N
TRERF1
Equus caballus
ENSECAG00000016971
N
TRERF1
Felis catus
ENSFCAG00000011210
N
ENSFALG00000012590
Ficedula albicollis
ENSFALG00000012590
N
TRERF1
Gallus gallus
ENSGALG00000009896
N
TRERF1
Gorilla gorilla
ENSGGOG00000012813
N
TRERF1
Homo sapiens
ENSG00000124496
N
ENSSTOG00000022996
Ictidomys tridecemlineatus
ENSSTOG00000022996
N
ENSLACG00000008926
Latimeria chalumnae
ENSLACG00000008926
N
ENSLOCG00000017240
Lepisosteus oculatus
ENSLOCG00000017240
N
TRERF1
Loxodonta africana
ENSLAFG00000007825
N
ENSP00000362013
Macaca fascicularis
ENSP00000362013
N
TRERF1
Meleagris gallopavo
ENSMGAG00000013894
N
TRERF1
Monodelphis domestica
ENSMODG00000019042
N
Myotis_brandtii_Trerf1_10015386
Myotis brandtii
Myotis_brandtii_Trerf1_10015386
N
TRERF1
Myotis lucifugus
ENSMLUG00000016748
N
ENSNLEG00000004772
Nomascus leucogenys
ENSNLEG00000004772
N
Ogr07462
Ophisaurus gracilis
Ogr07462
N
TRERF1
Ornithorhynchus anatinus
ENSOANG00000008467
N
TRERF1
Otolemur garnettii
ENSOGAG00000025610
N
ENSOARG00000003358
Ovis aries
ENSOARG00000003358
N
ENSPANG00000009451
Papio anubis
ENSPANG00000009451
N
ENSPSIG00000009755
Pelodiscus sinensis
ENSPSIG00000009755
N
Pvit_13408
Pogona vitticeps
Pvit_13408
N
ENSPPYG00000016614
Pongo abelii
ENSPPYG00000016614
N
TRERF1
Pteropus vampyrus
ENSPVAG00000007626
N
Trerf1
Rattus norvegicus
ENSRNOG00000022598
N
ENSSHAG00000004599
Sarcophilus harrisii
ENSSHAG00000004599
N
TRERF1
Sus scrofa
ENSSSCG00000001639
N
TRERF1
Taeniopygia guttata
ENSTGUG00000003250
N
ENSTSYG00000003874
Tarsius syrichta
ENSTSYG00000003874
N
ENSTBEG00000012133
Tupaia belangeri
ENSTBEG00000012133
N
TRERF1
Tursiops truncatus
ENSTTRG00000014065
N
trerf1
Xenopus tropicalis
XB-GENE-940630
N