Cucsa.057910 (Cucumis sativus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Cucsa.057910 T028080_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.057910.1 BED ZF 17 65
Cucsa.057910.2 BED ZF 17 65

Links

Other BED ZF family TFs
Other Cucumis sativus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.721
Bostr.28625s0227 Boechera stricta Bostr.28625s0227 N 0.795
Bo9g044150 Brassica oleracea Bo9g044150 N 0.750
Bo1g129970 Brassica oleracea Bo1g129970 N 0.795
PK12364.1 Cannabis sativa PK12364.1 N 0.955
Cagra.0007s0024 Capsella grandiflora Cagra.0007s0024 N 0.795
Carubv10013145m.g Capsella rubella Carubv10013145m.g N 0.795
Thhalv10020233m.g Eutrema salsugineum Thhalv10020233m.g N 0.795
gene27341-v1.0-hybrid Fragaria vesca gene27341-v1.0-hybrid N 0.955
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.714
GLYMA09G15135 Glycine max GLYMA09G15135 N 0.977
GLYMA15G27362 Glycine max GLYMA15G27362 N 0.977
Gorai.007G331900 Gossypium raimondii Gorai.007G331900 N 0.977
Gorai.004G271300 Gossypium raimondii Gorai.004G271300 N 0.929
Lus10005558.g Linum usitatissimum Lus10005558.g N 0.932
cassava7664.valid.m1 Manihot esculenta cassava7664.valid.m1 N 0.864
cassava7665.valid.m1 Manihot esculenta cassava7665.valid.m1 N 0.864
POPTR_0011s10500 Populus trichocarpa POPTR_0011s10500 N 0.909
POPTR_0001s39240 Populus trichocarpa POPTR_0001s39240 N 0.886
Pm014562 Prunus mume Pm014562 N 0.714
Pm011252 Prunus mume Pm011252 N 0.977
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.714
PRUPE_ppa002416mg Prunus persica PRUPE_ppa002416mg N 0.977
SapurV1A.0020s0660 Salix purpurea SapurV1A.0020s0660 N 0.886
SapurV1A.0026s0130 Salix purpurea SapurV1A.0026s0130 N 0.886
Solyc10g007470.2 Solanum lycopersicum Solyc10g007470.2 N 0.955
PGSC0003DMG400021296 Solanum tuberosum PGSC0003DMG400021296 N 0.955
TCM_032128 Theobroma cacao TCM_032128 N 0.977
VIT_19s0014g00320 Vitis vinifera VIT_19s0014g00320 N 0.955