Carubv10019846m.g (Capsella rubella)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Carubv10019846m.g T028227_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019846m BED ZF 105 146

Links

Other BED ZF family TFs
Other Capsella rubella TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G79740 Arabidopsis thaliana AT1G79740 N 1.000
PK04121.1 Cannabis sativa PK04121.1 N 0.825
evm.TU.supercontig_3.39 Carica papaya evm.TU.supercontig_3.39 N 0.842
Cla004997 Citrullus lanatus Cla004997 N 0.875
Cucsa.201910 Cucumis sativus Cucsa.201910 N 0.875
gene13122-v1.0-hybrid Fragaria vesca gene13122-v1.0-hybrid N 0.850
GLYMA06G12991 Glycine max GLYMA06G12991 N 0.825
MDP0000411586 Malus domestica MDP0000411586 N 0.775
MDP0000520527 Malus domestica MDP0000520527 N 0.775
PDK_20s1555001g001 Phoenix dactylifera PDK_20s1555001g001 N 0.828
PRUPE_ppa002763mg Prunus persica PRUPE_ppa002763mg N 0.825
30169.m006547 Ricinus communis 30169.m006547 N 0.850
Solyc03g007510.2 Solanum lycopersicum Solyc03g007510.2 N 0.769
PGSC0003DMG400009096 Solanum tuberosum PGSC0003DMG400009096 N 0.795
TCM_015328 Theobroma cacao TCM_015328 N 0.825
VIT_16s0050g02440 Vitis vinifera VIT_16s0050g02440 N 0.825