gene07401-v1.0-hybrid (Fragaria vesca)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 gene07401-v1.0-hybrid T028279_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna07401.1-v1.0-hybrid BED ZF 70 125

Links

Other BED ZF family TFs
Other Fragaria vesca TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_30558 Aegilops tauschii F775_30558 N
Eucgr.C01587 Eucalyptus grandis Eucgr.C01587 N
Eucgr.C01586 Eucalyptus grandis Eucgr.C01586 N
MLOC_19108 Hordeum vulgare MLOC_19108 N
LPERR02G17380 Leersia perrieri LPERR02G17380 N
OBART02G21440 Oryza barthii OBART02G21440 N
OB02G28900 Oryza brachyantha OB02G28900 N
ORGLA02G0184700 Oryza glaberrima ORGLA02G0184700 N
OGLUM02G21630 Oryza glumaepatula OGLUM02G21630 N
BGIOSGA006205 Oryza indica BGIOSGA006205 N
OLONG_009376 Oryza longistaminata OLONG_009376 N
OMERI02G21010 Oryza meridionalis OMERI02G21010 N
OPUNC02G19290 Oryza punctata OPUNC02G19290 N
ORUFI02G22530 Oryza rufipogon ORUFI02G22530 N
OS02G0572900 Oryza sativa OS02G0572900 N
Pavir.J13034 Panicum virgatum Pavir.J13034 N
Pavir.J32778 Panicum virgatum Pavir.J32778 N
Si017455m.g Setaria italica Si017455m.g N
Solyc04g056320.1 Solanum lycopersicum Solyc04g056320.1 N
PGSC0003DMG400003459 Solanum tuberosum PGSC0003DMG400003459 N
Sb04g023670 Sorghum bicolor Sb04g023670 N
Traes_6AL_393A90DDD Triticum aestivum Traes_6AL_393A90DDD N
Traes_6DL_3B9E63F04 Triticum aestivum Traes_6DL_3B9E63F04 N
VIT_07s0141g00020 Vitis vinifera VIT_07s0141g00020 N
GRMZM2G023988 Zea mays GRMZM2G023988 N