CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MLOC_19108
(
Hordeum vulgare
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
MLOC_19108
T123575_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_19108.1
C2H2 ZF
244
267
YACERCGGKKRFAVLADLRSHLRH
MLOC_19108.1
C2H2 ZF
275
298
RCSCGTTFSRKDKLFGHLALFEGH
Links
Other
C2H2 ZF
family TFs
Other
Hordeum vulgare
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006205
Oryza indica
BGIOSGA006205
N
0.827
GRMZM2G023988
Zea mays
GRMZM2G023988
N
0.827
OB02G28900
Oryza brachyantha
OB02G28900
N
0.827
OBART02G21440
Oryza barthii
OBART02G21440
N
0.827
OGLUM02G21630
Oryza glumaepatula
OGLUM02G21630
N
0.827
OLONG_009376
Oryza longistaminata
OLONG_009376
N
0.827
OMERI02G21010
Oryza meridionalis
OMERI02G21010
N
0.827
ONIVA02G23610
Oryza nivara
ONIVA02G23610
N
0.827
OPUNC02G19290
Oryza punctata
OPUNC02G19290
N
0.827
ORGLA02G0184700
Oryza glaberrima
ORGLA02G0184700
N
0.827
ORUFI02G22530
Oryza rufipogon
ORUFI02G22530
N
0.827
OS02G0572900
Oryza sativa
OS02G0572900
N
0.827
Sb04g023670
Sorghum bicolor
Sb04g023670
N
0.827
Si017455m.g
Setaria italica
Si017455m.g
N
0.827
Pavir.J13034
Panicum virgatum
Pavir.J13034
N
0.827
Pavir.J32778
Panicum virgatum
Pavir.J32778
N
0.827
LPERR02G17380
Leersia perrieri
LPERR02G17380
N
0.803
VIT_07s0141g00020
Vitis vinifera
VIT_07s0141g00020
N
0.778
PGSC0003DMG400003459
Solanum tuberosum
PGSC0003DMG400003459
N
0.759
Solyc04g056320.1
Solanum lycopersicum
Solyc04g056320.1
N
0.759
Eucgr.C01586
Eucalyptus grandis
Eucgr.C01586
N
0.759
Eucgr.C01587
Eucalyptus grandis
Eucgr.C01587
N
0.759
F775_30558
Aegilops tauschii
F775_30558
N
0.758
Traes_6AL_393A90DDD
Triticum aestivum
Traes_6AL_393A90DDD
N
0.758
Traes_6DL_3B9E63F04
Triticum aestivum
Traes_6DL_3B9E63F04
N
0.758