Pavir.Eb01543 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Eb01543 T028472_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb01543.1.p BED ZF 2 47
Pavir.Eb01543.1.p BED ZF 139 184
Pavir.Eb01543.1.p BED ZF 303 347
Pavir.Eb01543.1.p BED ZF 424 469

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_036300 Acremonium chrysogenum ACRE_036300 N
Bcin16g03200 Botrytis cinerea Bcin16g03200 N
CGGC5_6422 Colletotrichum gloeosporioides CGGC5_6422 N
GLRG_07948 Colletotrichum graminicola GLRG_07948 N
CH063_15372 Colletotrichum higginsianum CH063_15372 N
Cob_04621 Colletotrichum orbiculare Cob_04621 N
CSUB01_10288 Colletotrichum sublineola CSUB01_10288 N
CCM_02695 Cordyceps militaris CCM_02695 N
e_gw1.1.252.1 Cryphonectria parasitica e_gw1.1.252.1 N
FFUJ_03510 Fusarium fujikuroi FFUJ_03510 N
FGRRES_06503_M Fusarium graminearum FGRRES_06503_M N
FOXG_02462 Fusarium oxysporum FOXG_02462 N
FPSE_01754 Fusarium pseudograminearum FPSE_01754 N
NechaG104278 Fusarium solani NechaG104278 N
FVEG_05647 Fusarium verticillioides FVEG_05647 N
CMQ_7386 Grosmannia clavigera CMQ_7386 N
MGG_07681 Magnaporthe oryzae MGG_07681 N
MBM_04396 Marssonina brunnea MBM_04396 N
MAC_06318 Metarhizium acridum MAC_06318 N
MAM_02578 Metarhizium album MAM_02578 N
X797_007139 Metarhizium robertsii X797_007139 N
MYCTH_2063030 Myceliophthora thermophila MYCTH_2063030 N
estExt_fgenesh1_pm.C_sca_19_chr4_3_00096 Nectria haematococca estExt_fgenesh1_pm.C_sca_19_chr4_3_00096 N
sah-3 Neurospora crassa NCU07535 N
NEUTE1DRAFT_82727 Neurospora tetrasperma NEUTE1DRAFT_82727 N
OIDMADRAFT_36821 Oidiodendron maius OIDMADRAFT_36821 N
OCS_03381 Ophiocordyceps sinensis OCS_03381 N
F503_03088 Ophiostoma piceae uamh F503_03088 N
PFICI_11523 Pestalotiopsis fici PFICI_11523 N
PODANS_7_4800 Podospora anserina PODANS_7_4800 N
SBOR_1790 Sclerotinia borealis SBOR_1790 N
SMAC_02020 Sordaria macrospora SMAC_02020 N
SPBR_06536 Sporothrix brasiliensis SPBR_06536 N
HMPREF1624_06973 Sporothrix schenckii HMPREF1624_06973 N
S40288_09464 Stachybotrys chartarum S40288_09464 N
S40285_07091 Stachybotrys chlorohalonata S40285_07091 N
THITE_2118168 Thielavia terrestris THITE_2118168 N
UCRPA7_1286 Togninia minima UCRPA7_1286 N
VHEMI02209 Torrubiella hemipterigena VHEMI02209 N
TRIATDRAFT_127060 Trichoderma atroviride TRIATDRAFT_127060 N
TRIREDRAFT_123445 Trichoderma reesei TRIREDRAFT_123445 N
TRIVIDRAFT_38517 Trichoderma virens TRIVIDRAFT_38517 N
UV8b_7055 Ustilaginoidea virens UV8b_7055 N
VDBG_04664 Verticillium albo atrum VDBG_04664 N
VDBG_04664 Verticillium alfalfae VDBG_04664 N
VDAG_04205 Verticillium dahliae VDAG_04205 N