Pavir.J25423 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J25423 T028615_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J25423.1.p BED ZF 25 84

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_27817 Aegilops tauschii F775_27817 N
F775_05738 Aegilops tauschii F775_05738 N
F775_09162 Aegilops tauschii F775_09162 N
F775_09496 Aegilops tauschii F775_09496 N
F775_13070 Aegilops tauschii F775_13070 N
F775_13786 Aegilops tauschii F775_13786 N
F775_18370 Aegilops tauschii F775_18370 N
F775_18978 Aegilops tauschii F775_18978 N
BRADI3G00847 Brachypodium distachyon BRADI3G00847 N
BRADI3G00840 Brachypodium distachyon BRADI3G00840 N
BRADI4G23227 Brachypodium distachyon BRADI4G23227 N
MLOC_14883 Hordeum vulgare MLOC_14883 N
MLOC_56903 Hordeum vulgare MLOC_56903 N
Traes_4AL_3A009739E Triticum aestivum Traes_4AL_3A009739E N
Traes_6AS_E6F39D946 Triticum aestivum Traes_6AS_E6F39D946 N
Traes_6BS_276ACF176 Triticum aestivum Traes_6BS_276ACF176 N
Traes_6BS_2AC6A2287 Triticum aestivum Traes_6BS_2AC6A2287 N
Traes_6AS_D5A6B2CDD Triticum aestivum Traes_6AS_D5A6B2CDD N
Traes_6BS_3A00751B5 Triticum aestivum Traes_6BS_3A00751B5 N
Traes_6BS_AEF9F3C00 Triticum aestivum Traes_6BS_AEF9F3C00 N
Traes_6BS_B8A0BF56F Triticum aestivum Traes_6BS_B8A0BF56F N
Traes_6BS_EE1BBAFD1 Triticum aestivum Traes_6BS_EE1BBAFD1 N
Traes_6DS_2ED8299A11 Triticum aestivum Traes_6DS_2ED8299A11 N
Traes_6DS_48337A953 Triticum aestivum Traes_6DS_48337A953 N
Traes_6DS_87E97B55C Triticum aestivum Traes_6DS_87E97B55C N
Traes_6DS_8AB083B251 Triticum aestivum Traes_6DS_8AB083B251 N
Traes_6AS_48B701BB41 Triticum aestivum Traes_6AS_48B701BB41 N
Traes_1AL_3C796C3D3 Triticum aestivum Traes_1AL_3C796C3D3 N
Traes_1AL_C6CACDF78 Triticum aestivum Traes_1AL_C6CACDF78 N
Traes_1BL_A8B8F33D9 Triticum aestivum Traes_1BL_A8B8F33D9 N
Traes_1BS_613E9DBA6 Triticum aestivum Traes_1BS_613E9DBA6 N
Traes_1DL_0CDB6989D Triticum aestivum Traes_1DL_0CDB6989D N
Traes_1DL_5E046EFA0 Triticum aestivum Traes_1DL_5E046EFA0 N
Traes_2BS_0D569FC2A Triticum aestivum Traes_2BS_0D569FC2A N
Traes_3AS_D6334436F Triticum aestivum Traes_3AS_D6334436F N
Traes_5AL_DB9E0AA8D Triticum aestivum Traes_5AL_DB9E0AA8D N
Traes_5DL_A9969D596 Triticum aestivum Traes_5DL_A9969D596 N
Traes_6AS_073DEE100 Triticum aestivum Traes_6AS_073DEE100 N
Traes_6AS_8F6522734 Triticum aestivum Traes_6AS_8F6522734 N
TRIUR3_06344 Triticum urartu TRIUR3_06344 N
TRIUR3_06406 Triticum urartu TRIUR3_06406 N
TRIUR3_06575 Triticum urartu TRIUR3_06575 N
TRIUR3_30195 Triticum urartu TRIUR3_30195 N