CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GPUH_0002265101
(
Gongylonema pulchrum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
GPUH_0002265101
T029354_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002265101-mRNA-1
BED ZF
61
102
HPCWDLVQRIYEHNCMICRICSRVIKCINTRNAMQHFRSCHY
GPUH_0002265101-mRNA-1
BED ZF
151
191
HPSWRYFCRINRRSSNCRLCGAHVAYACSGNLMKHLKSRHI
Links
Other
BED ZF
family TFs
Other
Gongylonema pulchrum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g08461
Acanthocheilonema viteae
nAv.1.0.1.g08461
N
0.843
Bm5910
Brugia malayi
Bm5910
N
0.843
Bm9241
Brugia malayi
Bm9241
N
0.855
BTMF_0001732201
Brugia timori
BTMF_0001732201
N
0.855
nDi.2.2.2.g07509
Dirofilaria immitis
nDi.2.2.2.g07509
N
0.843
GPUH_0002035101
Gongylonema pulchrum
GPUH_0002035101
N
1.000
nLs.2.1.2.g03490
Litomosoides sigmodontis
nLs.2.1.2.g03490
N
0.855
LOAG_08862
Loa loa
LOAG_08862
N
0.855
OFLC_0000580201
Onchocerca flexuosa
OFLC_0000580201
N
0.855
nOo.2.0.1.g00706
Onchocerca ochengi
nOo.2.0.1.g00706
N
0.855
WUBG_03691
Wuchereria bancrofti
WUBG_03691
N
0.855