CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0002035101
(
Gongylonema pulchrum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
GPUH_0002035101
T029353_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002035101-mRNA-1
BED ZF
111
152
HPCWDLVQRIYEHNCMICRICSRVIKCINTRNAMQHFRSCHY
GPUH_0002035101-mRNA-1
BED ZF
201
241
HPSWRYFCRINRRSSNCRLCGAHVAYACSGNLMKHLKSRHI
Links
Other
BED ZF
family TFs
Other
Gongylonema pulchrum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPUH_0002265101
Gongylonema pulchrum
GPUH_0002265101
N
1.000
WUBG_03691
Wuchereria bancrofti
WUBG_03691
N
0.855
Bm9241
Brugia malayi
Bm9241
N
0.855
LOAG_08862
Loa loa
LOAG_08862
N
0.855
BTMF_0001732201
Brugia timori
BTMF_0001732201
N
0.855
nLs.2.1.2.g03490
Litomosoides sigmodontis
nLs.2.1.2.g03490
N
0.855
nOo.2.0.1.g00706
Onchocerca ochengi
nOo.2.0.1.g00706
N
0.855
OFLC_0000580201
Onchocerca flexuosa
OFLC_0000580201
N
0.855
Bm5910
Brugia malayi
Bm5910
N
0.843
nAv.1.0.1.g08461
Acanthocheilonema viteae
nAv.1.0.1.g08461
N
0.843
nDi.2.2.2.g07509
Dirofilaria immitis
nDi.2.2.2.g07509
N
0.843