maker-nMf.1.1.scaf08229-augustus-gene-0.3 (Meloidogyne floridensis)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 maker-nMf.1.1.scaf08229-augustus-gene-0.3 T029473_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf08229-augustus-gene-0.3-mRNA-1 BED ZF 3 50

Links

Other BED ZF family TFs
Other Meloidogyne floridensis TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
augustus_masked-nMf.1.1.scaf08526-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf08526-processed-gene-0.0 N 0.841
maker-nMf.1.1.scaf03419-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf03419-snap-gene-0.5 N 0.705
snap_masked-nMf.1.1.scaf09714-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf09714-processed-gene-0.3 N 0.811
Minc06865 Meloidogyne incognita Minc06865 N 1.000
Minc10370 Meloidogyne incognita Minc10370 N 0.864
Minc15971 Meloidogyne incognita Minc15971 N 0.977