AMTR_s00009p00175450 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00009p00175450 T030476_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH34
M01704_2.00 		Arabidopsis thaliana
VCACGYGH
DCRCGTGB		 PBM
Weirauch et al.(2014)
pTH7212 		0.851 0.780
BHLH34
M06734_2.00 		Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN		 Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a 		0.851 0.780
BHLH34
M06735_2.00 		Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY		 Dap-seq
OMalley et al.(2016)
bHLH34_col 		0.851 0.780
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM94918 bHLH 63 112

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018899 Ailuropoda melanoleuca ENSAMEG00000018899 N
ENSP00000321370-D1 Bos grunniens ENSP00000321370-D1 N
ZBED2 Bos taurus ENSBTAG00000046637 N
ZBED3 Callithrix jacchus ENSCJAG00000019950 N
ZBED2 Callithrix jacchus ENSCJAG00000020209 N
ZBED2 Canis familiaris ENSCAFG00000030690 N
Cmyd_10015684 Chelonia mydas Cmyd_10015684 N
ENSCSAG00000018719 Chlorocebus sabaeus ENSCSAG00000018719 N
ENSCSAG00000019417 Chlorocebus sabaeus ENSCSAG00000019417 N
ENSCHOG00000003372 Choloepus hoffmanni ENSCHOG00000003372 N
ZBED2 Choloepus hoffmanni ENSCHOG00000009685 N
ZBED2 Dasypus novemcinctus ENSDNOG00000013027 N
ZBED3 Dasypus novemcinctus ENSDNOG00000041041 N
ZBED2 Equus caballus ENSECAG00000001371 N
ZBED3 Gorilla gorilla ENSGGOG00000002896 N
ZBED2 Gorilla gorilla ENSGGOG00000010755 N
ZBED2 Homo sapiens ENSG00000177494 N
ZBED3 Homo sapiens ENSG00000132846 N
ENSSTOG00000003989 Ictidomys tridecemlineatus ENSSTOG00000003989 N
ZBED3 Loxodonta africana ENSLAFG00000001192 N
ENSP00000321370 Macaca fascicularis ENSP00000321370 N
ZBED3 Macaca mulatta ENSMMUG00000021357 N
ENSMMUG00000032061 Macaca mulatta ENSMMUG00000032061 N
ENSMEUG00000007529 Macropus eugenii ENSMEUG00000007529 N
ZBED2 Monodelphis domestica ENSMODG00000025309 N
ENSMPUG00000018931 Mustela putorius furo ENSMPUG00000018931 N
Myotis_brandtii_ZBED2_10003001 Myotis brandtii Myotis_brandtii_ZBED2_10003001 N
ZBED2 Myotis lucifugus ENSMLUG00000024352 N
ENSNLEG00000004079 Nomascus leucogenys ENSNLEG00000004079 N
ENSNLEG00000012648 Nomascus leucogenys ENSNLEG00000012648 N
ENSOANG00000015761 Ornithorhynchus anatinus ENSOANG00000015761 N
ZBED2 Oryctolagus cuniculus ENSOCUG00000029023 N
ZBED2 Otolemur garnettii ENSOGAG00000034292 N
ZBED3 Otolemur garnettii ENSOGAG00000033172 N
ENSOARG00000001810 Ovis aries ENSOARG00000001810 N
ZBED2 Pan troglodytes ENSPTRG00000015206 N
ENSPANG00000009749 Papio anubis ENSPANG00000009749 N
ENSPANG00000001756 Papio anubis ENSPANG00000001756 N
ENSPPYG00000013560 Pongo abelii ENSPPYG00000013560 N
ENSPCAG00000010917 Procavia capensis ENSPCAG00000010917 N
ZBED2 Sorex araneus ENSSARG00000010422 N
ZBED2 Sus scrofa ENSSSCG00000011936 N
ZBED3 Sus scrofa ENSSSCG00000014095 N
ENSTSYG00000000791 Tarsius syrichta ENSTSYG00000000791 N
ZBED2 Vicugna pacos ENSVPAG00000000425 N