Bo4g150960 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo4g150960 T031172_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.914 1.000
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.882 0.612
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.858 0.592
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.858 0.592
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.858 0.592
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.858 0.571
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.858 0.571
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.846 0.571
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g150960.1 bHLH 144 192

Links

Other bHLH family TFs
Other Brassica oleracea TFs

529 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KLTH0D13618g Kluyveromyces thermotolerans KLTH0D13618g I
KLTH0D13618g Lachancea thermotolerans KLTH0D13618g I
NCAS_0A02360 Naumovozyma castellii NCAS_0A02360 I
NCAS_0J01300 Naumovozyma castellii NCAS_0J01300 I
NDAI_0D04510 Naumovozyma dairenensis NDAI_0D04510 I
SU7_0544 Saccharomyces arboricola SU7_0544 I
SU7_2363 Saccharomyces arboricola SU7_2363 I
3742_YDL048C Saccharomyces bayanus 3742_YDL048C I
16393_YLR375W Saccharomyces bayanus 16393_YLR375W I
Scas_Contig670.2 Saccharomyces castellii Scas_Contig670.2 I
Scas_Contig683.30 Saccharomyces castellii Scas_Contig683.30 I
STP3 Saccharomyces cerevisiae YLR375W D
STP4 Saccharomyces cerevisiae YDL048C D
SKUD_202710 Saccharomyces kudriavzevii SKUD_202710 I
15823_YLR375W Saccharomyces mikatae 15823_YLR375W I
3056_YDL048C Saccharomyces mikatae 3056_YDL048C I
15460_YLR375W Saccharomyces paradoxus 15460_YLR375W I
3579_YDL048C Saccharomyces paradoxus 3579_YDL048C I
TDEL_0E01520 Torulaspora delbrueckii TDEL_0E01520 I
ZBAI_06958 Zygosaccharomyces bailii ZBAI_06958 I
ZYRO0B07436g Zygosaccharomyces rouxii ZYRO0B07436g I