CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CapteG80741
(
Capitella teleta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CapteG80741
T031906_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf21
M01746_2.00
Mus musculus
RMCAKMTGK
MCAKMTGKY
PBM
Weirauch et al.(2014)
pTH5087
0.886
0.938
Tcf21
M02819_2.00
Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB
SELEX
Jolma et al.(2013)
Tcf21_1
0.886
0.938
TCF21
M04092_2.00
Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1
0.886
0.938
TCF21
M04093_2.00
Homo sapiens
NRCCATATGKYV
BRMCATATGGYN
SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2
0.886
0.938
TCF21
M04094_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1
0.886
0.938
TCF21
M04095_2.00
Homo sapiens
BACCATATGKYV
BRMCATATGGTV
SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2
0.886
0.938
Msc
M01730_2.00
Mus musculus
NVCRKMYGBN
NVCRKMYGBN
PBM
Weirauch et al.(2014)
pTH5112
0.886
0.917
MSC
M02801_2.00
Homo sapiens
AACAGCTGTT
AACAGCTGTT
SELEX
Jolma et al.(2013)
MSC_1
0.886
0.917
MSC
M04183_2.00
Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1
0.886
0.917
MSC
M04184_2.00
Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2
0.886
0.917
MSC
M04187_2.00
Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1
0.886
0.917
MSC
M04188_2.00
Homo sapiens
BRMCATATGKYN
NRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2
0.886
0.917
MSC
M04185_2.00
Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1
0.886
0.917
MSC
M04186_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2
0.886
0.917
MSC
M04189_2.00
Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1
0.886
0.917
MSC
M04190_2.00
Homo sapiens
BRMCATATGKYV
BRMCATATGKYV
SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2
0.886
0.917
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CapteP80741
bHLH
1
49
ANERERARMRVLSKAFGRLKTTLPWVPADTKLSKLDTLRLASSYIAHLR
Links
Other
bHLH
family TFs
Other
Capitella teleta
TFs
182 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_052210
Acremonium chrysogenum
ACRE_052210
N
AOL_s00215g416
Arthrobotrys oligospora
AOL_s00215g416
N
COCC4DRAFT_202082
Bipolaris maydis
COCC4DRAFT_202082
N
COCMIDRAFT_98420
Bipolaris oryzae
COCMIDRAFT_98420
N
COCSADRAFT_314350
Bipolaris sorokiniana
COCSADRAFT_314350
N
COCVIDRAFT_111354
Bipolaris victoriae
COCVIDRAFT_111354
N
COCCADRAFT_88010
Bipolaris zeicola
COCCADRAFT_88010
N
Bcin07g06120
Botrytis cinerea
Bcin07g06120
N
estExt_Genewise1Plus.C_230145
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_230145
N
CFIO01_13657
Colletotrichum fioriniae
CFIO01_13657
I
CGGC5_1182
Colletotrichum gloeosporioides
CGGC5_1182
I
GLRG_02795
Colletotrichum graminicola
GLRG_02795
I
Cob_10554
Colletotrichum orbiculare
Cob_10554
I
CSUB01_04506
Colletotrichum sublineola
CSUB01_04506
I
W97_07490
Coniosporium apollinis
W97_07490
N
fgenesh1_pm.C_scaffold_3000627
Cryphonectria parasitica
fgenesh1_pm.C_scaffold_3000627
I
H072_9547
Dactylellina haptotyla
H072_9547
N
FFUJ_04739
Fusarium fujikuroi
FFUJ_04739
N
FGRRES_09770
Fusarium graminearum
FGRRES_09770
N
FOXG_08297
Fusarium oxysporum
FOXG_08297
N
FPSE_02297
Fusarium pseudograminearum
FPSE_02297
N
NechaG91043
Fusarium solani
NechaG91043
N
LEMA_P059350.1
Leptosphaeria maculans
LEMA_P059350.1
N
MPH_07157
Macrophomina phaseolina
MPH_07157
N
MGG_01776
Magnaporthe oryzae
MGG_01776
I
MAPG_00912
Magnaporthe poae
MAPG_00912
I
MBM_01735
Marssonina brunnea
MBM_01735
I
MGU_01057
Metarhizium guizhouense
MGU_01057
N
MAJ_01848
Metarhizium majus
MAJ_01848
N
X797_005188
Metarhizium robertsii
X797_005188
N
fgenesh1_pm.sca_18_chr2_1_0000447
Nectria haematococca
fgenesh1_pm.sca_18_chr2_1_0000447
N
NCU05242
Neurospora crassa
NCU05242
D
estExt_fgenesh2_pg.C_120074
Neurospora discreta
estExt_fgenesh2_pg.C_120074
I
NEUTE1DRAFT_121638
Neurospora tetrasperma
NEUTE1DRAFT_121638
I
OIDMADRAFT_140709
Oidiodendron maius
OIDMADRAFT_140709
I
PFICI_04450
Pestalotiopsis fici
PFICI_04450
I
SNOG_12578
Phaeosphaeria nodorum
SNOG_12578
N
PODANS_3_3750
Podospora anserina
PODANS_3_3750
I
GMDG_04017
Pseudogymnoascus destructans
GMDG_04017
I
V499_02646
Pseudogymnoascus pannorum
V499_02646
I
PTT_14634
Pyrenophora teres
PTT_14634
N
PTRG_11331
Pyrenophora triticirepentis
PTRG_11331
N
SETTUDRAFT_164235
Setosphaeria turcica
SETTUDRAFT_164235
N
SMAC_01749
Sordaria macrospora
SMAC_01749
I
SNOG_12578
Stagonospora nodorum
SNOG_12578
N
THITE_2115801
Thielavia terrestris
THITE_2115801
I
TRIATDRAFT_181530
Trichoderma atroviride
TRIATDRAFT_181530
N
PV09_03074
Verruconis gallopava
PV09_03074
N