arnt (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000021855 T033660_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.884 0.981
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.884 0.981
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.884 0.981
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.884 0.981
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.884 0.981
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.884 0.981
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.884 0.981
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.884 0.907
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.884 0.907
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.884 0.907
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000028315 bHLH 64 117
ENSDARP00000076292 bHLH 64 117
ENSDARP00000107928 bHLH 64 117
ENSDARP00000110017 bHLH 64 117
ENSDARP00000112110 bHLH 64 117

Links

Other bHLH family TFs
Other Danio rerio TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI002601 Acyrthosiphon pisum ACYPI002601 I
AAEL010031 Aedes aegypti AAEL010031 I
ENSAMEG00000005942 Ailuropoda melanoleuca ENSAMEG00000005942 I
ENSAMEG00000015953 Ailuropoda melanoleuca ENSAMEG00000015953 I
Alligator_sinensis_CCG001917.1 Alligator sinensis Alligator_sinensis_CCG001917.1 I
ENSAPLG00000008024 Anas platyrhynchos ENSAPLG00000008024 I
TCF21 Anolis carolinensis ENSACAG00000010325 I
MSC Anolis carolinensis ENSACAG00000014585 I
AALB007560 Anopheles albimanus AALB007560 I
AALB007822 Anopheles albimanus AALB007822 I
AARA007787 Anopheles arabiensis AARA007787 I
AATE012411 Anopheles atroparvus AATE012411 I
ACHR000018 Anopheles christyi ACHR000018 I
ACOM025280 Anopheles coluzzii ACOM025280 I
ACUA017871 Anopheles culicifacies ACUA017871 I
ADIR008037 Anopheles dirus ADIR008037 I
AEPI000467 Anopheles epiroticus AEPI000467 I
AFUN008043 Anopheles funestus AFUN008043 I
AGAP007124 Anopheles gambiae AGAP007124 I
AMAM016192 Anopheles maculatus AMAM016192 I
AMEC000644 Anopheles melas AMEC000644 I
AMEM011707 Anopheles merus AMEM011707 I
AMIN011264 Anopheles minimus AMIN011264 I
AQUA002051 Anopheles quadriannulatus AQUA002051 I
ASTEI06898 Anopheles stephensi ASTEI06898 I
GB42177 Apis mellifera GB42177 I
Afo_R014913 Aptenodytes forsteri Afo_R014913 I
ENSAMXG00000000487 Astyanax mexicanus ENSAMXG00000000487 I
ENSAMXG00000004351 Astyanax mexicanus ENSAMXG00000004351 I
ACEP13483 Atta cephalotes ACEP13483 I
BGLB011346 Biomphalaria glabrata BGLB011346 I
BGIBMGA012033 Bombyx mori BGIBMGA012033 I
ENSBTAP00000044112-D1 Bos grunniens ENSBTAP00000044112-D1 I
ENSBTAP00000052463-D1 Bos grunniens ENSBTAP00000052463-D1 I
MSC Bos taurus ENSBTAG00000005404 I
TCF21 Bos taurus ENSBTAG00000021827 I
fgenesh2_pg.scaffold_201000026 Branchiostoma floridae fgenesh2_pg.scaffold_201000026 I
fgenesh2_pg.scaffold_201000027 Branchiostoma floridae fgenesh2_pg.scaffold_201000027 I
fgenesh2_pg.scaffold_201000028 Branchiostoma floridae fgenesh2_pg.scaffold_201000028 I
fgenesh2_pg.scaffold_201000029 Branchiostoma floridae fgenesh2_pg.scaffold_201000029 I
gw.912.11.1 Branchiostoma floridae gw.912.11.1 I
Brh_R005605 Buceros rhinoceros Brh_R005605 I
TCF21 Callithrix jacchus ENSCJAG00000002811 I
MSC Callithrix jacchus ENSCJAG00000007766 I
Aan_R009769 Calypte anna Aan_R009769 I
Cflo_04912--XP_001121050.1_APIME Camponotus floridanus Cflo_04912--XP_001121050.1_APIME I
TCF21 Canis familiaris ENSCAFG00000000205 I
MSC Canis familiaris ENSCAFG00000007923 I
CapteG80741 Capitella teleta CapteG80741 I
ENSCPOG00000004726 Cavia porcellus ENSCPOG00000004726 I
TCF21 Cavia porcellus ENSCPOG00000024201 I
ENSCSAG00000013709 Chlorocebus sabaeus ENSCSAG00000013709 I
ENSCSAG00000016705 Chlorocebus sabaeus ENSCSAG00000016705 I
CLEC012607 Cimex lectularius CLEC012607 I
csin111822 Clonorchis sinensis csin111822 I
CGI_10026944 Crassostrea gigas CGI_10026944 I
CpipJ_CPIJ016930 Culex pipiens CpipJ_CPIJ016930 I
CPIJ016930 Culex quinquefasciatus CPIJ016930 I
KGM_20305 Danaus plexippus KGM_20305 I
tcf21 Danio rerio ENSDARG00000036869 I
msc Danio rerio ENSDARG00000045353 I
DAPPUDRAFT_37461 Daphnia pulex DAPPUDRAFT_37461 I
MSC Dasypus novemcinctus ENSDNOG00000019019 I
TCF21 Dasypus novemcinctus ENSDNOG00000042846 I
ECANG7_04949 Echinococcus canadensis ECANG7_04949 I
EmuJ_000624300 Echinococcus multilocularis EmuJ_000624300 I
TCF21 Echinops telfairi ENSETEG00000012492 I
MSC Equus caballus ENSECAG00000008333 I
TCF21 Equus caballus ENSECAG00000019197 I
MSC Erinaceus europaeus ENSEEUG00000005021 I
D915_08809 Fasciola hepatica D915_08809 I
TCF21 Felis catus ENSFCAG00000031261 I
ENSFALG00000008455 Ficedula albicollis ENSFALG00000008455 I
ENSFALG00000011861 Ficedula albicollis ENSFALG00000011861 I
ENSGMOG00000019481 Gadus morhua ENSGMOG00000019481 I
ENSGALG00000019470 Gallus gallus ENSGALG00000019470 I
TCF21 Gallus gallus ENSGALG00000029024 I
msc Gasterosteus aculeatus ENSGACG00000002802 I
tcf21 Gasterosteus aculeatus ENSGACG00000010957 I
Gfo_R006439 Geospiza fortis Gfo_R006439 I
TCF21 Gorilla gorilla ENSGGOG00000005460 I
MSC Gorilla gorilla ENSGGOG00000009955 I
HHAL000695-PA Halyomorpha halys HHAL000695-PA I
Hsal_01862--XP_001122645.1_APIME Harpegnathos saltator Hsal_01862--XP_001122645.1_APIME I
HelroG188977 Helobdella robusta HelroG188977 I
TCF21 Homo sapiens ENSG00000118526 D
MSC Homo sapiens ENSG00000178860 D
ENSSTOG00000023733 Ictidomys tridecemlineatus ENSSTOG00000023733 I
ENSSTOG00000024832 Ictidomys tridecemlineatus ENSSTOG00000024832 I
ISCW019706 Ixodes scapularis ISCW019706 I
ENSLACG00000005024 Latimeria chalumnae ENSLACG00000005024 I
ENSLACG00000014348 Latimeria chalumnae ENSLACG00000014348 I
ENSLOCG00000003912 Lepisosteus oculatus ENSLOCG00000003912 I
ENSLOCG00000016232 Lepisosteus oculatus ENSLOCG00000016232 I
LDEC005027 Leptinotarsa decemlineata LDEC005027 I
LotgiG99224 Lottia gigantea LotgiG99224 I
MSC Loxodonta africana ENSLAFG00000002649 I
TCF21 Loxodonta africana ENSLAFG00000009507 I
LLOJ001927 Lutzomyia longipalpis LLOJ001927 I
ENSP00000321445 Macaca fascicularis ENSP00000321445 I
ENSP00000356857 Macaca fascicularis ENSP00000356857 I
MSC Macaca mulatta ENSMMUG00000000947 I
TCF21 Macaca mulatta ENSMMUG00000002871 I
ENSMEUG00000005491 Macropus eugenii ENSMEUG00000005491 I
TCF21 Meleagris gallopavo ENSMGAG00000013117 I
MCOS_0000023201 Mesocestoides corti MCOS_0000023201 I
ENSMICG00000014144 Microcebus murinus ENSMICG00000014144 I
MSC Monodelphis domestica ENSMODG00000007225 I
TCF21 Monodelphis domestica ENSMODG00000017516 I
ENSMPUG00000010593 Mustela putorius furo ENSMPUG00000010593 I
ENSMPUG00000014798 Mustela putorius furo ENSMPUG00000014798 I
Msc Mus musculus ENSMUSG00000025930 D
Tcf21 Mus musculus ENSMUSG00000045680 D
Myotis_brandtii_TCF21_10035690 Myotis brandtii Myotis_brandtii_TCF21_10035690 I
MSC Myotis lucifugus ENSMLUG00000008572 I
TCF21 Myotis lucifugus ENSMLUG00000009194 I
ENSNLEG00000011452 Nomascus leucogenys ENSNLEG00000011452 I
ENSNLEG00000014647 Nomascus leucogenys ENSNLEG00000014647 I
Ogr02938 Ophisaurus gracilis Ogr02938 I
T265_00953 Opisthorchis viverrini T265_00953 I
ENSONIG00000000446 Oreochromis niloticus ENSONIG00000000446 I
ENSONIG00000014278 Oreochromis niloticus ENSONIG00000014278 I
TCF21 Ornithorhynchus anatinus ENSOANG00000013098 I
MSC Oryctolagus cuniculus ENSOCUG00000007208 I
msc Oryzias latipes ENSORLG00000008030 I
tcf21 Oryzias latipes ENSORLG00000016491 I
MSC Otolemur garnettii ENSOGAG00000013827 I
TCF21 Otolemur garnettii ENSOGAG00000034073 I
ENSOARG00000004844 Ovis aries ENSOARG00000004844 I
ENSOARG00000014623 Ovis aries ENSOARG00000014623 I
TCF21 Pan troglodytes ENSPTRG00000018622 I
MSC Pan troglodytes ENSPTRG00000020339 I
ENSPANG00000022301 Papio anubis ENSPANG00000022301 I
ENSPANG00000024238 Papio anubis ENSPANG00000024238 I
PHUM294350 Pediculus humanus PHUM294350 I
ENSPSIG00000003604 Pelodiscus sinensis ENSPSIG00000003604 I
ENSPMAG00000000379 Petromyzon marinus ENSPMAG00000000379 I
PPAI008462 Phlebotomus papatasi PPAI008462 I
ENSPFOG00000010821 Poecilia formosa ENSPFOG00000010821 I
ENSPFOG00000020725 Poecilia formosa ENSPFOG00000020725 I
ENSPPYG00000017022 Pongo abelii ENSPPYG00000017022 I
ENSPPYG00000018665 Pongo abelii ENSPPYG00000018665 I
MSC Procavia capensis ENSPCAG00000004330 I
ENSPCAG00000006459 Procavia capensis ENSPCAG00000006459 I
MSC Pteropus vampyrus ENSPVAG00000009083 I
TCF21 Pteropus vampyrus ENSPVAG00000009085 I
Msc Rattus norvegicus ENSRNOG00000007540 I
Tcf21 Rattus norvegicus ENSRNOG00000016700 I
RPRC001590 Rhodnius prolixus RPRC001590 I
Sakowv30031408m.g Saccoglossus kowalevskii Sakowv30031408m.g I
ENSSHAG00000002801 Sarcophilus harrisii ENSSHAG00000002801 I
ENSSHAG00000004870 Sarcophilus harrisii ENSSHAG00000004870 I
SCUD_0001558401 Schistosoma curassoni SCUD_0001558401 I
A_02746 Schistosoma haematobium A_02746 I
Sjc_0073180 Schistosoma japonicum Sjc_0073180 I
Smp_022610 Schistosoma mansoni Smp_022610 I
SMRZ_0001749101 Schistosoma margrebowiei SMRZ_0001749101 I
SMTD_0000660301 Schistosoma mattheei SMTD_0000660301 I
SINV12414 Solenopsis invicta SINV12414 I
SMAR006929 Strigamia maritima SMAR006929 I
SPU_012008 Strongylocentrotus purpuratus SPU_012008 I
ENSSSCG00000004174 Sus scrofa ENSSSCG00000004174 I
MSC Sus scrofa ENSSSCG00000006187 I
TASK_0000025401 Taenia asiatica TASK_0000025401 I
TsM_000945000 Taenia solium TsM_000945000 I
MSC Taeniopygia guttata ENSTGUG00000011502 I
TCF21 Taeniopygia guttata ENSTGUG00000011548 I
tcf21 Takifugu rubripes ENSTRUG00000003919 I
msc Takifugu rubripes ENSTRUG00000012425 I
msc Tetraodon nigroviridis ENSTNIG00000008188 I
tcf21 Tetraodon nigroviridis ENSTNIG00000016326 I
TC002349 Tribolium castaneum TC002349 I
TRE_0000636201 Trichobilharzia regenti TRE_0000636201 I
MSC Tupaia belangeri ENSTBEG00000014659 I
TCF21 Tursiops truncatus ENSTTRG00000009645 I
MSC Tursiops truncatus ENSTTRG00000017260 I
MSC Vicugna pacos ENSVPAG00000000378 I
TCF21 Vicugna pacos ENSVPAG00000006271 I
tcf21.L Xenopus laevis XB-GENE-484809 I
tcf21 Xenopus tropicalis XB-GENE-484805 I
msc Xenopus tropicalis XB-GENE-978233 I
ENSXMAG00000004322 Xiphophorus maculatus ENSXMAG00000004322 I
ENSXMAG00000010332 Xiphophorus maculatus ENSXMAG00000010332 I
L798_06836 Zootermopsis nevadensis L798_06836 I