MSC (Equus caballus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSECAG00000008333 T033929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 1.000
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 1.000
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 1.000
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 1.000
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 1.000
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 1.000
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 1.000
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 1.000
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.914 0.981
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.914 0.981
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 0.981
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 0.981
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000006308 bHLH 79 131

Links

Other bHLH family TFs
Other Equus caballus TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR01G32380 Leersia perrieri LPERR01G32380 N
OBART07G07450 Oryza barthii OBART07G07450 N
OBART07G07440 Oryza barthii OBART07G07440 N
OBART01G37720 Oryza barthii OBART01G37720 N
OB01G46450 Oryza brachyantha OB01G46450 N
OB07G17380 Oryza brachyantha OB07G17380 N
ORGLA01G0315200 Oryza glaberrima ORGLA01G0315200 N
ORGLA07G0062800 Oryza glaberrima ORGLA07G0062800 N
ORGLA07G0073600 Oryza glaberrima ORGLA07G0073600 N
OGLUM07G07150 Oryza glumaepatula OGLUM07G07150 N
OGLUM07G07870 Oryza glumaepatula OGLUM07G07870 N
BGIOSGA025449 Oryza indica BGIOSGA025449 N
BGIOSGA004824 Oryza indica BGIOSGA004824 N
BGIOSGA024590 Oryza indica BGIOSGA024590 N
OLONG_012136 Oryza longistaminata OLONG_012136 N
OLONG_021151 Oryza longistaminata OLONG_021151 N
OLONG_023640 Oryza longistaminata OLONG_023640 N
OMERI07G07070 Oryza meridionalis OMERI07G07070 N
ONIVA07G05990 Oryza nivara ONIVA07G05990 N
ONIVA07G07540 Oryza nivara ONIVA07G07540 N
ONIVA07G05980 Oryza nivara ONIVA07G05980 N
ONIVA01G42540 Oryza nivara ONIVA01G42540 N
OPUNC01G36560 Oryza punctata OPUNC01G36560 N
OPUNC07G07180 Oryza punctata OPUNC07G07180 N
OPUNC07G08180 Oryza punctata OPUNC07G08180 N
ORUFI01G41050 Oryza rufipogon ORUFI01G41050 N
ORUFI07G07450 Oryza rufipogon ORUFI07G07450 N
ORUFI07G07460 Oryza rufipogon ORUFI07G07460 N
ORUFI07G08780 Oryza rufipogon ORUFI07G08780 N
OS01G0855400 Oryza sativa OS01G0855400 N
GRMZM2G121570 Zea mays GRMZM2G121570 N