twist2 (Gasterosteus aculeatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGACG00000002227 T034360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.883 0.863
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.883 0.863
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.883 0.863
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.883 0.863
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.883 0.863
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.883 0.863
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.883 0.863
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.879 0.922
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.879 0.902
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.879 0.902
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.879 0.902
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.879 0.902
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.879 0.902
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000002888 bHLH 72 122

Links

Other bHLH family TFs
Other Gasterosteus aculeatus TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019668 Ailuropoda melanoleuca ENSAMEG00000019668 N
ENSP00000406955-D1 Bos grunniens ENSP00000406955-D1 N
ZBTB38 Bos taurus ENSBTAG00000040061 N
ZBTB38 Callithrix jacchus ENSCJAG00000031471 N
ZBTB38 Canis familiaris ENSCAFG00000007664 N
ENSCSAG00000018910 Chlorocebus sabaeus ENSCSAG00000018910 N
ZBTB38 Dasypus novemcinctus ENSDNOG00000037832 N
ENSDORG00000005705 Dipodomys ordii ENSDORG00000005705 N
ZBTB38 Erinaceus europaeus ENSEEUG00000000264 N
ZBTB38 Felis catus ENSFCAG00000030922 N
ZBTB38 Gorilla gorilla ENSGGOG00000023008 N
ZBTB38 Homo sapiens ENSG00000177311 N
ENSSTOG00000025333 Ictidomys tridecemlineatus ENSSTOG00000025333 N
ENSP00000372635 Macaca fascicularis ENSP00000372635 N
ZBTB38 Macaca mulatta ENSMMUG00000031526 N
ENSMPUG00000019344 Mustela putorius furo ENSMPUG00000019344 N
Zbtb38 Mus musculus ENSMUSG00000040433 N
ZBTB38 Myotis lucifugus ENSMLUG00000012512 N
ENSNLEG00000004569 Nomascus leucogenys ENSNLEG00000004569 N
ZBTB38 Ochotona princeps ENSOPRG00000009539 N
ZBTB38 Otolemur garnettii ENSOGAG00000009394 N
ENSOARG00000015487 Ovis aries ENSOARG00000015487 N
ZBTB38 Pan troglodytes ENSPTRG00000030108 N
ENSPANG00000018989 Papio anubis ENSPANG00000018989 N
ZBTB38 Pteropus vampyrus ENSPVAG00000017499 N
Zbtb38 Rattus norvegicus ENSRNOG00000012386 N
ENSSSCG00000021674 Sus scrofa ENSSSCG00000021674 N
ZBTB38 Sus scrofa ENSSSCG00000022073 N
ENSTSYG00000009951 Tarsius syrichta ENSTSYG00000009951 N
ZBTB38 Vicugna pacos ENSVPAG00000007353 N