CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000019019
(
Gadus morhua
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSGMOG00000019019
T034771_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atoh1
M01754_2.00
Mus musculus
NMCATATGKN
NMCATATGKN
PBM
Weirauch et al.(2014)
pTH5074
0.840
0.865
Atoh1
M02820_2.00
Mus musculus
RMCATATGBY
RVCATATGKY
SELEX
Jolma et al.(2013)
Atoh1_1
0.840
0.865
ATOH1
M04166_2.00
Homo sapiens
RACAGCTGYY
RRCAGCTGTY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1
0.840
0.865
ATOH1
M04167_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2
0.840
0.865
ATOH1
M08738_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B
0.840
0.865
Atoh1
M08779_2.00
Mus musculus
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B
0.840
0.865
Atoh1
M09480_2.00
Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN
Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111
0.840
0.865
ATOH1
M09877_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MATH1_Q2
0.840
0.865
ATOH1
M04168_2.00
Homo sapiens
AACAGCTGTY
RACAGCTGTT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1
0.840
0.865
ATOH1
M04169_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2
0.840
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000020447
bHLH
108
160
RRVAANARERRRMHGLNYAFDELRRVIPAFDNDKKLSKYETLQMAQIYINALA
Links
Other
bHLH
family TFs
Other
Gadus morhua
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCJAG00000032790
Callithrix jacchus
ENSCJAG00000032790
I
ENSCPOG00000026099
Cavia porcellus
ENSCPOG00000026099
I
ENSDNOG00000031015
Dasypus novemcinctus
ENSDNOG00000031015
I
ENSDNOG00000048270
Dasypus novemcinctus
ENSDNOG00000048270
I
ENSLAFG00000026006
Loxodonta africana
ENSLAFG00000026006
I
ENSLAFG00000029465
Loxodonta africana
ENSLAFG00000029465
I
Cphx3
Mus musculus
ENSMUSG00000094817
I
Cphx1
Mus musculus
ENSMUSG00000095975
D
Cphx2
Mus musculus
ENSMUSG00000098463
I
ENSNLEG00000013097
Nomascus leucogenys
ENSNLEG00000013097
I
Cphx
Rattus norvegicus
ENSRNOG00000025433
I