ENSLACG00000005491 (Latimeria chalumnae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLACG00000005491 T034805_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Atoh1
M01754_2.00
Mus musculus
NMCATATGKN

NMCATATGKN
PBM
Weirauch et al.(2014)
pTH5074
0.890 0.962
Atoh1
M02820_2.00
Mus musculus
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
Atoh1_1
0.890 0.962
ATOH1
M04166_2.00
Homo sapiens
RACAGCTGYY

RRCAGCTGTY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1
0.890 0.962
ATOH1
M04167_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2
0.890 0.962
ATOH1
M08738_2.00
Homo sapiens
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B
0.890 0.962
Atoh1
M08779_2.00
Mus musculus
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B
0.890 0.962
Atoh1
M09480_2.00
Mus musculus
NNRVCAKMTGBY

RVCAKMTGBYNN
Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111
0.890 0.962
ATOH1
M09877_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MATH1_Q2
0.890 0.962
ATOH1
M04168_2.00
Homo sapiens
AACAGCTGTY

RACAGCTGTT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1
0.890 0.962
ATOH1
M04169_2.00
Homo sapiens
AVCATATGBY

RVCATATGBT
SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2
0.890 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000006193 bHLH 126 178

Links

Other bHLH family TFs
Other Latimeria chalumnae TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000003022 Astyanax mexicanus ENSAMXG00000003022 I
atoh1b Danio rerio ENSDARG00000099564 I
ENSLACG00000013212 Latimeria chalumnae ENSLACG00000013212 I 0.844
ENSLOCG00000011944 Lepisosteus oculatus ENSLOCG00000011944 I
ENSONIG00000017784 Oreochromis niloticus ENSONIG00000017784 I
ENSPFOG00000023785 Poecilia formosa ENSPFOG00000023785 I
ENSXMAG00000009786 Xiphophorus maculatus ENSXMAG00000009786 I