ENSPSIG00000011880 (Pelodiscus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPSIG00000011880 T036959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.914 1.000
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.914 1.000
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.914 1.000
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.914 1.000
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.914 1.000
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.914 1.000
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.914 1.000
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.914 1.000
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.914 1.000
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.914 1.000
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.914 1.000
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.914 1.000
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.914 0.885
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.914 0.885
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.914 0.885
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.912 0.962
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.912 0.962
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.912 0.962
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.912 0.962
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.912 0.962
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.912 0.962
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.912 0.962
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.912 0.962
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.886 0.962
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.886 0.962
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.886 0.962
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000013279 bHLH 603 656

Links

Other bHLH family TFs
Other Pelodiscus sinensis TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI005878 Acyrthosiphon pisum ACYPI005878 N
ACYPI29974 Acyrthosiphon pisum ACYPI29974 N
ACYPI34776 Acyrthosiphon pisum ACYPI34776 N
AAEL013408 Aedes aegypti AAEL013408 I
ENSAMEG00000010672 Ailuropoda melanoleuca ENSAMEG00000010672 I
Alligator_sinensis_CCG021031.1 Alligator sinensis Alligator_sinensis_CCG021031.1 I
ENSAPLG00000011215 Anas platyrhynchos ENSAPLG00000011215 I
DEAF1 Anolis carolinensis ENSACAG00000015102 I
AALB004583 Anopheles albimanus AALB004583 I
AARA003510 Anopheles arabiensis AARA003510 I
AATE015987 Anopheles atroparvus AATE015987 I
ACHR007416 Anopheles christyi ACHR007416 I
ACOM036369 Anopheles coluzzii ACOM036369 I
ACUA011008 Anopheles culicifacies ACUA011008 I
ADAC006957 Anopheles darlingi ADAC006957 I
ADIR001685 Anopheles dirus ADIR001685 I
AEPI005273 Anopheles epiroticus AEPI005273 I
AFAF013455 Anopheles farauti AFAF013455 I
AFUN005053 Anopheles funestus AFUN005053 I
AGAP004905 Anopheles gambiae AGAP004905 I
AMAM018568 Anopheles maculatus AMAM018568 I
AMEC000569 Anopheles melas AMEC000569 I
AMEM010249 Anopheles merus AMEM010249 I
AMIN011402 Anopheles minimus AMIN011402 I
AQUA000322 Anopheles quadriannulatus AQUA000322 I
ASIS014192 Anopheles sinensis ASIS014192 I
ASTEI10643 Anopheles stephensi ASTEI10643 I
GB41654 Apis mellifera GB41654 I
Afo_R011879 Aptenodytes forsteri Afo_R011879 I
ENSAMXG00000016516 Astyanax mexicanus ENSAMXG00000016516 I
ACEP13992 Atta cephalotes ACEP13992 I
BGLB009094 Biomphalaria glabrata BGLB009094 I
BGIBMGA002019 Bombyx mori BGIBMGA002019 I
ENSP00000371846-D1 Bos grunniens ENSP00000371846-D1 I
fgenesh2_pg.scaffold_59000067 Branchiostoma floridae fgenesh2_pg.scaffold_59000067 I
fgenesh2_pg.scaffold_59000072 Branchiostoma floridae fgenesh2_pg.scaffold_59000072 I
DEAF1 Callithrix jacchus ENSCJAG00000011996 I
Aan_R010721 Calypte anna Aan_R010721 I
Cflo_07037--XP_395757.2_APIME Camponotus floridanus Cflo_07037--XP_395757.2_APIME I
DEAF1 Canis familiaris ENSCAFG00000006569 I
CapteG228571 Capitella teleta CapteG228571 I
DEAF1 Cavia porcellus ENSCPOG00000006073 I
Cmyd_10004045 Chelonia mydas Cmyd_10004045 I
ENSCSAG00000010763 Chlorocebus sabaeus ENSCSAG00000010763 I
CLEC001236 Cimex lectularius CLEC001236 I
CGI_10012910 Crassostrea gigas CGI_10012910 I
CpipJ_CPIJ007045 Culex pipiens CpipJ_CPIJ007045 I
CPIJ007045 Culex quinquefasciatus CPIJ007045 I
KGM_18605 Danaus plexippus KGM_18605 I
deaf1 Danio rerio ENSDARG00000088844 I
DEAF1 Dasypus novemcinctus ENSDNOG00000000274 I
YQE_06816 Dendroctonus ponderosae YQE_06816 I
Deaf1 Dipodomys ordii ENSDORG00000015737 I
DEAF1 Equus caballus ENSECAG00000010151 I
DEAF1 Felis catus ENSFCAG00000007591 I
ENSFALG00000010923 Ficedula albicollis ENSFALG00000010923 I
ENSGMOG00000000222 Gadus morhua ENSGMOG00000000222 I
ENSGALG00000005089 Gallus gallus ENSGALG00000005089 I
deaf1 Gasterosteus aculeatus ENSGACG00000008942 I
Gfo_R011899 Geospiza fortis Gfo_R011899 I
DEAF1 Gorilla gorilla ENSGGOG00000014020 I
HHAL006904-PA Halyomorpha halys HHAL006904-PA I
Hsal_03559--XP_395757.2_APIME Harpegnathos saltator Hsal_03559--XP_395757.2_APIME I
HMEL013517 Heliconius melpomene HMEL013517 I
DEAF1 Homo sapiens ENSG00000177030 I
ENSSTOG00000004165 Ictidomys tridecemlineatus ENSSTOG00000004165 I
ISCW003915 Ixodes scapularis ISCW003915 I
ENSLACG00000014207 Latimeria chalumnae ENSLACG00000014207 I
ENSLOCG00000002360 Lepisosteus oculatus ENSLOCG00000002360 I
LotgiG168359 Lottia gigantea LotgiG168359 I
DEAF1 Loxodonta africana ENSLAFG00000023242 I
LLOJ006782 Lutzomyia longipalpis LLOJ006782 I
ENSP00000371846 Macaca fascicularis ENSP00000371846 I
DEAF1 Macaca mulatta ENSMMUG00000002660 I
ENSMEUG00000005016 Macropus eugenii ENSMEUG00000005016 I
DEAF1 Meleagris gallopavo ENSMGAG00000003765 I
MCINX013640 Melitaea cinxia MCINX013640 I
DEAF1 Microcebus murinus ENSMICG00000001602 I
ENSMPUG00000008992 Mustela putorius furo ENSMPUG00000008992 I
Deaf1 Mus musculus ENSMUSG00000058886 I
Myotis_brandtii_DEAF1_10008461 Myotis brandtii Myotis_brandtii_DEAF1_10008461 I
DEAF1 Myotis lucifugus ENSMLUG00000026576 I
NV18168 Nasonia vitripennis NV18168 I
ENSNLEG00000008479 Nomascus leucogenys ENSNLEG00000008479 I
ENSOPRG00000002240 Ochotona princeps ENSOPRG00000002240 I
Ocbimv22013386m.g Octopus bimaculoides Ocbimv22013386m.g I
Ogr05554 Ophisaurus gracilis Ogr05554 I
ENSONIG00000003936 Oreochromis niloticus ENSONIG00000003936 I
deaf1 Oryzias latipes ENSORLG00000019407 I
DEAF1 Otolemur garnettii ENSOGAG00000006434 I
ENSOARG00000006285 Ovis aries ENSOARG00000006285 I
DEAF1 Pan troglodytes ENSPTRG00000003129 D
ENSPANG00000008597 Papio anubis ENSPANG00000008597 I
PHUM581340 Pediculus humanus PHUM581340 I
ENSPSIG00000016545 Pelodiscus sinensis ENSPSIG00000016545 I
ENSPMAG00000004264 Petromyzon marinus ENSPMAG00000004264 I
PPAI007052 Phlebotomus papatasi PPAI007052 I
ENSPFOG00000014257 Poecilia formosa ENSPFOG00000014257 I
Pvit_08245 Pogona vitticeps Pvit_08245 I
DEAF1 Pteropus vampyrus ENSPVAG00000006883 I
Deaf1 Rattus norvegicus ENSRNOG00000017960 I
RPRC001228 Rhodnius prolixus RPRC001228 I
Sakowv30032927m.g Saccoglossus kowalevskii Sakowv30032927m.g I
ENSSHAG00000002042 Sarcophilus harrisii ENSSHAG00000002042 I
SINV20880 Solenopsis invicta SINV20880 I
SMAR003119 Strigamia maritima SMAR003119 I
SPU_014381 Strongylocentrotus purpuratus SPU_014381 N
DEAF1 Sus scrofa ENSSSCG00000012850 I
DEAF1 Taeniopygia guttata ENSTGUG00000007185 I
deaf1 Tetraodon nigroviridis ENSTNIG00000016068 I
TC000085 Tribolium castaneum TC000085 I
DEAF1 Tursiops truncatus ENSTTRG00000015418 I
deaf1 Xenopus tropicalis XB-GENE-1216227 I
ENSXMAG00000013352 Xiphophorus maculatus ENSXMAG00000013352 I
L798_01684 Zootermopsis nevadensis L798_01684 I