CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000012547
(
Tarsius syrichta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSTSYG00000012547
T037974_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.914
1.000
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.914
1.000
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.914
1.000
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.914
1.000
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY
RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.914
1.000
NEUROD1
M09873_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.914
1.000
NEUROD1
M09874_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.914
1.000
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.914
1.000
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.879
0.962
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY
RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.879
0.962
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG
CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.879
0.962
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB
VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.879
0.962
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.879
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000011505
bHLH
102
154
RRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS
Links
Other
bHLH
family TFs
Other
Tarsius syrichta
TFs
269 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_30589
Aegilops tauschii
F775_30589
I
0.000
BRADI4G04720
Brachypodium distachyon
BRADI4G04720
I
0.000
MLOC_51930
Hordeum vulgare
MLOC_51930
I
0.000
LPERR12G12950
Leersia perrieri
LPERR12G12950
I
0.000
OBART12G15770
Oryza barthii
OBART12G15770
I
0.000
ORGLA12G0138000
Oryza glaberrima
ORGLA12G0138000
I
0.000
ORGLA11G0215100
Oryza glaberrima
ORGLA11G0215100
I
0.000
OGLUM12G17310
Oryza glumaepatula
OGLUM12G17310
I
0.000
BGIOSGA037592
Oryza indica
BGIOSGA037592
I
0.000
OMERI02G09390
Oryza meridionalis
OMERI02G09390
I
0.000
ONIVA12G14510
Oryza nivara
ONIVA12G14510
I
0.000
OPUNC12G14150
Oryza punctata
OPUNC12G14150
I
0.000
ORUFI12G17520
Oryza rufipogon
ORUFI12G17520
I
0.000
Pavir.Ca02565
Panicum virgatum
Pavir.Ca02565
I
0.000
Pavir.Cb00560
Panicum virgatum
Pavir.Cb00560
I
0.000
Si023541m.g
Setaria italica
Si023541m.g
I
0.000
Traes_5BS_FF44610EF1
Triticum aestivum
Traes_5BS_FF44610EF1
I
0.000
Traes_5DS_011851EE7
Triticum aestivum
Traes_5DS_011851EE7
I
0.000
GRMZM2G479885
Zea mays
GRMZM2G479885
D
0.000
GRMZM2G160902
Zea mays
GRMZM2G160902
I
0.000