fgenesh2_kg.108__1__AT2G40200.1 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.108__1__AT2G40200.1 T039099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK01630.1
M01118_2.00 		Cannabis sativa
GCACGTGD
HCACGTGC		 PBM
Lambert et al.(2019)
pTH11426 		0.845 0.776
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.108__1__AT2G40200.1 bHLH 63 111

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01256 Aegilops tauschii F775_01256 I
F775_03877 Aegilops tauschii F775_03877 I
AMTR_s00059p00187950 Amborella trichopoda AMTR_s00059p00187950 I
AMTR_s00099p00163300 Amborella trichopoda AMTR_s00099p00163300 I
Aquca_014_00018 Aquilegia coerulea Aquca_014_00018 I
ANAC034 Arabidopsis lyrata fgenesh2_kg.5__152__AT2G02450.1 I
NAC035 Arabidopsis thaliana AT2G02450 D
Bostr.0556s0069 Boechera stricta Bostr.0556s0069 I
BRADI2G25150 Brachypodium distachyon BRADI2G25150 I
BRADI2G57297 Brachypodium distachyon BRADI2G57297 I
Bo2g136280 Brassica oleracea Bo2g136280 I
Bo7g080470 Brassica oleracea Bo7g080470 I
Bo9g071690 Brassica oleracea Bo9g071690 I
Bra017416 Brassica rapa Bra017416 I
Bra024818 Brassica rapa Bra024818 I
Bra026595 Brassica rapa Bra026595 I
PK24240.1 Cannabis sativa PK24240.1 I
Cagra.0534s0046 Capsella grandiflora Cagra.0534s0046 I
Carubv10017334m.g Capsella rubella Carubv10017334m.g I
Ca_18171 Cicer arietinum Ca_18171 I
Cla004630 Citrullus lanatus Cla004630 I
Ciclev10001346m.g Citrus clementina Ciclev10001346m.g I
Ciclev10001401m.g Citrus clementina Ciclev10001401m.g I
orange1.1g016095m.g Citrus sinensis orange1.1g016095m.g I
orange1.1g046996m.g Citrus sinensis orange1.1g046996m.g I
Cucsa.260400 Cucumis sativus Cucsa.260400 I
Eucgr.G00054 Eucalyptus grandis Eucgr.G00054 I
Thhalv10004330m.g Eutrema salsugineum Thhalv10004330m.g I
gene29260-v1.0-hybrid Fragaria vesca gene29260-v1.0-hybrid I
GLYMA07G40140 Glycine max GLYMA07G40140 I
GLYMA17G00650 Glycine max GLYMA17G00650 I
Gorai.010G142400 Gossypium raimondii Gorai.010G142400 I
Gorai.011G090000 Gossypium raimondii Gorai.011G090000 I
MLOC_57215 Hordeum vulgare MLOC_57215 I
MLOC_69621 Hordeum vulgare MLOC_69621 I
LPERR01G34330 Leersia perrieri LPERR01G34330 I
LPERR05G13320 Leersia perrieri LPERR05G13320 I
LPERR08G01330 Leersia perrieri LPERR08G01330 I
Lus10003366.g Linum usitatissimum Lus10003366.g N
Lus10003367.g Linum usitatissimum Lus10003367.g I
Lus10008420.g Linum usitatissimum Lus10008420.g I
Lus10008897.g Linum usitatissimum Lus10008897.g I
Lus10023208.g Linum usitatissimum Lus10023208.g I
chr4.CM0525.60.nd Lotus japonicus chr4.CM0525.60.nd I
MDP0000189394 Malus domestica MDP0000189394 I
MDP0000679946 Malus domestica MDP0000679946 I
cassava17150.m1 Manihot esculenta cassava17150.m1 I
cassava23178.valid.m1 Manihot esculenta cassava23178.valid.m1 I
MTR_4g134460 Medicago truncatula MTR_4g134460 I
mgf015326m Mimulus guttatus mgf015326m I
GSMUA_Achr10G04320_001 Musa acuminata GSMUA_Achr10G04320_001 I
GSMUA_Achr10G10690_001 Musa acuminata GSMUA_Achr10G10690_001 I
GSMUA_Achr11G08970_001 Musa acuminata GSMUA_Achr11G08970_001 I
GSMUA_Achr3G21690_001 Musa acuminata GSMUA_Achr3G21690_001 I
GSMUA_Achr5G17060_001 Musa acuminata GSMUA_Achr5G17060_001 I
GSMUA_Achr7G23650_001 Musa acuminata GSMUA_Achr7G23650_001 I
OBART01G39900 Oryza barthii OBART01G39900 I
OBART05G16760 Oryza barthii OBART05G16760 I
OBART08G01010 Oryza barthii OBART08G01010 I
OB01G48600 Oryza brachyantha OB01G48600 I
OB05G24670 Oryza brachyantha OB05G24670 I
OB08G11180 Oryza brachyantha OB08G11180 I
ORGLA01G0337900 Oryza glaberrima ORGLA01G0337900 I
ORGLA05G0144900 Oryza glaberrima ORGLA05G0144900 I
ORGLA08G0004000 Oryza glaberrima ORGLA08G0004000 I
OGLUM01G44090 Oryza glumaepatula OGLUM01G44090 I
OGLUM05G17770 Oryza glumaepatula OGLUM05G17770 I
OGLUM08G01070 Oryza glumaepatula OGLUM08G01070 I
BGIOSGA004950 Oryza indica BGIOSGA004950 I
BGIOSGA004951 Oryza indica BGIOSGA004951 I
BGIOSGA018041 Oryza indica BGIOSGA018041 I
BGIOSGA027877 Oryza indica BGIOSGA027877 I
OLONG_011893 Oryza longistaminata OLONG_011893 I
OLONG_025605 Oryza longistaminata OLONG_025605 I
OMERI05G14550 Oryza meridionalis OMERI05G14550 I
OMERI08G01230 Oryza meridionalis OMERI08G01230 I
ONIVA01G44740 Oryza nivara ONIVA01G44740 I
ONIVA05G17420 Oryza nivara ONIVA05G17420 I
ONIVA08G01010 Oryza nivara ONIVA08G01010 I
OPUNC01G38590 Oryza punctata OPUNC01G38590 I
OPUNC05G14760 Oryza punctata OPUNC05G14760 I
OPUNC08G00950 Oryza punctata OPUNC08G00950 I
ORUFI01G43220 Oryza rufipogon ORUFI01G43220 I
ORUFI05G17970 Oryza rufipogon ORUFI05G17970 I
ORUFI08G01040 Oryza rufipogon ORUFI08G01040 I
OS01G0888300 Oryza sativa OS01G0888300 I
OS05G0418800 Oryza sativa OS05G0418800 I
Pavir.Ea03596 Panicum virgatum Pavir.Ea03596 I
Pavir.Fa02204 Panicum virgatum Pavir.Fa02204 N
Pavir.J00477 Panicum virgatum Pavir.J00477 I
Pavir.J03312 Panicum virgatum Pavir.J03312 I
Pavir.J07491 Panicum virgatum Pavir.J07491 I
PDK_20s1594511g001 Phoenix dactylifera PDK_20s1594511g001 I
POPTR_0003s03670 Populus trichocarpa POPTR_0003s03670 I
POPTR_0004s23970 Populus trichocarpa POPTR_0004s23970 I
Pm003809 Prunus mume Pm003809 I
PRUPE_ppa021989m2g Prunus persica PRUPE_ppa021989m2g I
30063.m001417 Ricinus communis 30063.m001417 I
SapurV1A.0198s0420 Salix purpurea SapurV1A.0198s0420 I
SapurV1A.0847s0050 Salix purpurea SapurV1A.0847s0050 I
Si001651m.g Setaria italica Si001651m.g I
Si013995m.g Setaria italica Si013995m.g N
Si022103m.g Setaria italica Si022103m.g I
Solyc01g102740.2 Solanum lycopersicum Solyc01g102740.2 I
PGSC0003DMG400018262 Solanum tuberosum PGSC0003DMG400018262 I
Sb03g042210 Sorghum bicolor Sb03g042210 I
Sb09g020590 Sorghum bicolor Sb09g020590 I
TCM_027945 Theobroma cacao TCM_027945 I
Traes_1DL_D79FDE483 Triticum aestivum Traes_1DL_D79FDE483 N
Traes_3AL_490F09661 Triticum aestivum Traes_3AL_490F09661 I
TRAES3BF097200010CFD_g Triticum aestivum TRAES3BF097200010CFD_g I
TRAES3BF098000010CFD_g Triticum aestivum TRAES3BF098000010CFD_g I
TRAES3BF114300070CFD_g Triticum aestivum TRAES3BF114300070CFD_g I
TRIUR3_28413 Triticum urartu TRIUR3_28413 I
TRIUR3_29543 Triticum urartu TRIUR3_29543 I
ANAC034 Vitis vinifera VIT_12s0035g02020 I
GRMZM2G134687 Zea mays GRMZM2G134687 I
GRMZM2G147867 Zea mays GRMZM2G147867 I
GRMZM5G813651 Zea mays GRMZM5G813651 I