CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KGM_08280
(
Danaus plexippus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
KGM_08280
T040637_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TWIST1
M08052_2.00
Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN
ChIP-seq
Mathelier et al.(2014)
MA1123.1
0.873
0.865
TWIST1
M08722_2.00
Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW
Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A
0.873
0.865
Twist1
M08766_2.00
Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW
Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B
0.873
0.865
TWIST1
M09831_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6_01
0.873
0.865
TWIST1
M09832_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TWIST_Q6
0.873
0.865
Twist2
M01718_2.00
Mus musculus
NACATATGKN
NMCATATGTN
PBM
Weirauch et al.(2014)
pTH5033
0.873
0.827
twi
M03605_2.00
Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK
SELEX
Nitta et al.(2015)
twi_1
0.840
0.846
twi
M03606_2.00
Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK
SELEX
Nitta et al.(2015)
twi_2
0.840
0.846
twi
M05955_2.00
Drosophila melanogaster
VCCAGATGTB
VACATCTGGB
B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900
0.840
0.846
twi
M05956_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900
0.840
0.846
twi
M07538_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
DNaseI footprinting
Mathelier et al.(2014)
MA0249.1
0.840
0.846
twi
M09657_2.00
Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT
Misc
Kulakovskiy et al.(2009)
twi
0.840
0.846
twi
M09892_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TWI_Q6
0.840
0.846
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHJ68458
bHLH
171
222
QRVMANVRERQRTQSLNEAFASLRQIIPSLPSDKLSKIQTLQLATQYIEFLY
Links
Other
bHLH
family TFs
Other
Danaus plexippus
TFs
208 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL002079
Aedes aegypti
AAEL002079
N
AALB002019
Anopheles albimanus
AALB002019
N
AARA005043
Anopheles arabiensis
AARA005043
N
ACHR001889
Anopheles christyi
ACHR001889
N
ACOM030546
Anopheles coluzzii
ACOM030546
N
ACUA002940
Anopheles culicifacies
ACUA002940
N
ADAC008437
Anopheles darlingi
ADAC008437
N
AGAP008084
Anopheles gambiae
AGAP008084
N
AMEC008629
Anopheles melas
AMEC008629
N
AMEM005132
Anopheles merus
AMEM005132
N
AMIN006189
Anopheles minimus
AMIN006189
N
AQUA001070
Anopheles quadriannulatus
AQUA001070
N
CpipJ_CPIJ001883
Culex pipiens
CpipJ_CPIJ001883
N
CPIJ001883
Culex quinquefasciatus
CPIJ001883
N
KGM_04269
Danaus plexippus
KGM_04269
N
HMEL016431
Heliconius melpomene
HMEL016431
N
PPAI007775
Phlebotomus papatasi
PPAI007775
N