CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC02G21170
(
Oryza punctata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
OPUNC02G21170
T042749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.887
0.863
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.851
0.804
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.851
0.804
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.845
0.784
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.845
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC02G21170.1
bHLH
227
277
ATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQ
Links
Other
bHLH
family TFs
Other
Oryza punctata
TFs
231 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_ABL099W
Ashbya gossypii
AGOS_ABL099W
N
CAGL0K11902g
Candida glabrata
CAGL0K11902g
I
Ecym_5131
Eremothecium cymbalariae
Ecym_5131
I
KAFR_0E01250
Kazachstania africana
KAFR_0E01250
I
KNAG_0H01260
Kazachstania naganishii
KNAG_0H01260
I
KLLA0_F04213g
Kluyveromyces lactis
KLLA0_F04213g
I
SAKL0D03586g
Lachancea kluyveri
SAKL0D03586g
I
NCAS_0A10550
Naumovozyma castellii
NCAS_0A10550
N
NDAI_0A05750
Naumovozyma dairenensis
NDAI_0A05750
I
SU7_0595
Saccharomyces arboricola
SU7_0595
I
21342_YDR034C
Saccharomyces bayanus
21342_YDR034C
I
Scas_Contig661.23
Saccharomyces castellii
Scas_Contig661.23
N
LYS14
Saccharomyces cerevisiae
YDR034C
D
SKUD_203807
Saccharomyces kudriavzevii
SKUD_203807
I
3344_Multiple
Saccharomyces mikatae
3344_Multiple
I
3859_YDR034C
Saccharomyces paradoxus
3859_YDR034C
I
AACERI_AaceriABL099W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABL099W
I
TBLA_0I01890
Tetrapisispora blattae
TBLA_0I01890
I
TPHA_0M01040
Tetrapisispora phaffii
TPHA_0M01040
I
ZBAI_04585
Zygosaccharomyces bailii
ZBAI_04585
I
ZBAI_06624
Zygosaccharomyces bailii
ZBAI_06624
I
ZYRO0A03058g
Zygosaccharomyces rouxii
ZYRO0A03058g
I