TCM_024828 (Theobroma cacao)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 TCM_024828 T045399_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.914 0.980
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.868 0.824
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.868 0.824
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.868 0.824
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.855 0.804
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.855 0.804
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.855 0.804
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.855 0.784
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.842 0.765
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.842 0.765
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.839 0.725
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.839 0.706
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.839 0.706
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY09403 bHLH 200 250
EOY09404 bHLH 200 250
EOY09405 bHLH 200 250

Links

Other bHLH family TFs
Other Theobroma cacao TFs

741 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g10286 Acanthocheilonema viteae nAv.1.0.1.g10286 I 0.000
HR96 Aedes aegypti AAEL007202 I 0.000
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I 0.000
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I 0.000
ACAC_0001358501 Angiostrongylus cantonensis ACAC_0001358501 I 0.000
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I 0.000
ACOC_0000352001 Angiostrongylus costaricensis ACOC_0000352001 N 0.000
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I 0.000
AALB008395 Anopheles albimanus AALB008395 I 0.000
AARA011580 Anopheles arabiensis AARA011580 I 0.000
AATE006049 Anopheles atroparvus AATE006049 I 0.000
ACOM033140 Anopheles coluzzii ACOM033140 I 0.000
ACUA008166 Anopheles culicifacies ACUA008166 I 0.000
ADAC003041 Anopheles darlingi ADAC003041 I 0.000
ADIR005534 Anopheles dirus ADIR005534 I 0.000
AEPI000232 Anopheles epiroticus AEPI000232 I 0.000
AFAF019254 Anopheles farauti AFAF019254 I 0.000
AFUN010189 Anopheles funestus AFUN010189 I 0.000
AGAP004224 Anopheles gambiae AGAP004224 I 0.000
AMAM022585 Anopheles maculatus AMAM022585 I 0.000
AMEC016766 Anopheles melas AMEC016766 I 0.000
AMEM008752 Anopheles merus AMEM008752 I 0.000
AMIN004130 Anopheles minimus AMIN004130 I 0.000
AQUA008824 Anopheles quadriannulatus AQUA008824 I 0.000
ASIS011648 Anopheles sinensis ASIS011648 I 0.000
ASTEI03690 Anopheles stephensi ASTEI03690 I 0.000
GB52904 Apis mellifera GB52904 I 0.000
ASU_07898 Ascaris suum ASU_07898 I 0.000
ACEP16468 Atta cephalotes ACEP16468 I 0.000
BGLB005044 Biomphalaria glabrata BGLB005044 I 0.000
BGIBMGA010782 Bombyx mori BGIBMGA010782 I 0.000
Bm3787 Brugia malayi Bm3787 I 0.000
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I 0.000
BXY_1432000 Bursaphelenchus xylophilus BXY_1432000 I 0.000
CBN06351 Caenorhabditis brenneri CBN06351 I 0.000
CBN26095 Caenorhabditis brenneri CBN26095 I 0.000
CBN31767 Caenorhabditis brenneri CBN31767 I 0.000
CBG04512 Caenorhabditis briggsae CBG04512 I 0.000
CBG07759 Caenorhabditis briggsae CBG07759 I 0.000
daf-12 Caenorhabditis elegans WBGene00000908 D 0.000
nhr-48 Caenorhabditis elegans WBGene00003638 I 0.000
CJA03214 Caenorhabditis japonica CJA03214 I 0.000
CJA11532 Caenorhabditis japonica CJA11532 I 0.000
CRE07237 Caenorhabditis remanei CRE07237 I 0.000
CRE19106 Caenorhabditis remanei CRE19106 I 0.000
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I 0.000
CapteG121837 Capitella teleta CapteG121837 I 0.000
CapteG224377 Capitella teleta CapteG224377 I 0.000
CLEC000589 Cimex lectularius CLEC000589 I 0.000
CpipJ_CPIJ016038 Culex pipiens CpipJ_CPIJ016038 I 0.000
CPIJ016038 Culex quinquefasciatus CPIJ016038 I 0.000
KGM_05575 Danaus plexippus KGM_05575 I 0.000
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I 0.000
YQE_04331 Dendroctonus ponderosae YQE_04331 I 0.000
DICVIV_03942 Dictyocaulus viviparus DICVIV_03942 I 0.000
nDi.2.2.2.g04518 Dirofilaria immitis nDi.2.2.2.g04518 I 0.000
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I 0.000
DME_0000702701 Dracunculus medinensis DME_0000702701 I 0.000
DME_0000943901 Dracunculus medinensis DME_0000943901 I 0.000
GF16320 Drosophila ananassae FBgn0093341 I 0.000
GG11347 Drosophila erecta FBgn0103647 I 0.000
Hr96 Drosophila grimshawi FBgn0020174 I 0.000
Hr96 Drosophila melanogaster FBgn0015240 D 0.000
GI22223 Drosophila mojavensis FBgn0144951 I 0.000
GA11197 Drosophila pseudoobscura FBgn0071252 I 0.000
GM17786 Drosophila sechellia FBgn0172693 I 0.000
GD21158 Drosophila simulans FBgn0192609 I 0.000
GJ24344 Drosophila virilis FBgn0211424 I 0.000
GK14276 Drosophila willistoni FBgn0216282 I 0.000
GE23543 Drosophila yakuba FBgn0240719 I 0.000
EEL_0000817201 Elaeophora elaphi EEL_0000817201 I 0.000
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I 0.000
HCOI01526000 Haemonchus contortus HCOI01526000 I 0.000
HPLM_0001602501 Haemonchus placei HPLM_0001602501 I 0.000
HHAL000201-PA Halyomorpha halys HHAL000201-PA I 0.000
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I 0.000
HMEL016865 Heliconius melpomene HMEL016865 I 0.000
HelroG99849 Helobdella robusta HelroG99849 I 0.000
ISCW009328 Ixodes scapularis ISCW009328 I 0.000
LDEC005794 Leptinotarsa decemlineata LDEC005794 I 0.000
LOAG_10538 Loa loa LOAG_10538 I 0.000
LCUP002913 Lucilia cuprina LCUP002913 I 0.000
MCINX005291 Melitaea cinxia MCINX005291 I 0.000
MhA1_Contig1158.frz3.gene18 Meloidogyne hapla MhA1_Contig1158.frz3.gene18 I 0.000
Minc13296 Meloidogyne incognita Minc13296 I 0.000
Minc18589 Meloidogyne incognita Minc18589 I 0.000
MDOA002084 Musca domestica MDOA002084 I 0.000
NV10187 Nasonia vitripennis NV10187 I 0.000
NECAME_01947 Necator americanus NECAME_01947 I 0.000
WBGene00239037 Onchocerca volvulus WBGene00239037 I 0.000
PTRK_0000134600 Parastrongyloides trichosuri PTRK_0000134600 N 0.000
PTRK_0001132000 Parastrongyloides trichosuri PTRK_0001132000 I 0.000
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I 0.000
PHUM460970 Pediculus humanus PHUM460970 I 0.000
PPAI005921 Phlebotomus papatasi PPAI005921 I 0.000
scaffold1545-EXSNAP2012.2 Pristionchus exspectatus scaffold1545-EXSNAP2012.2 I 0.000
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I 0.000
scaffold889-EXSNAP2012.10 Pristionchus exspectatus scaffold889-EXSNAP2012.10 I 0.000
Ppa-nhr-8 Pristionchus pacificus PPA17111 I 0.000
Ppa-nhr-48 Pristionchus pacificus PPA20177 I 0.000
RSKR_0000789200 Rhabditophanes kr3021 RSKR_0000789200 I 0.000
RSKR_0001015700 Rhabditophanes kr3021 RSKR_0001015700 I 0.000
RPRC001794 Rhodnius prolixus RPRC001794 I 0.000
L596_g8771 Steinernema carpocapsae L596_g8771 I 0.000
L596_g9326 Steinernema carpocapsae L596_g9326 I 0.000
L889_g10853 Steinernema feltiae L889_g10853 I 0.000
L893_g16225 Steinernema glaseri L893_g16225 I 0.000
L898_g10498 Steinernema monticolum L898_g10498 I 0.000
L898_g1817 Steinernema monticolum L898_g1817 I 0.000
L892_g18386 Steinernema scapterisci L892_g18386 I 0.000
L892_g26350 Steinernema scapterisci L892_g26350 I 0.000
SMAR007355 Strigamia maritima SMAR007355 I 0.000
SPAL_0000150000 Strongyloides papillosus SPAL_0000150000 I 0.000
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I 0.000
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I 0.000
SSTP_0001272200 Strongyloides stercoralis SSTP_0001272200 I 0.000
SVE_0958300 Strongyloides venezuelensis SVE_0958300 I 0.000
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I 0.000
SVUK_0001112701 Strongylus vulgaris SVUK_0001112701 I 0.000
SMUV_0000312501 Syphacia muris SMUV_0000312501 I 0.000
SMUV_0001002101 Syphacia muris SMUV_0001002101 I 0.000
TELCIR_04889 Teladorsagia circumcincta TELCIR_04889 I 0.000
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I 0.000
tetur17g03630 Tetranychus urticae tetur17g03630 I 0.000
tetur34g00750 Tetranychus urticae tetur34g00750 I 0.000
TCLT_0000386701 Thelazia callipaeda TCLT_0000386701 I 0.000
TC010645 Tribolium castaneum TC010645 I 0.000
WUBG_12640 Wuchereria bancrofti WUBG_12640 I 0.000
WUBG_13334 Wuchereria bancrofti WUBG_13334 I 0.000
L798_15710 Zootermopsis nevadensis L798_15710 I 0.000