Afo_R014889 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R014889 T046610_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Olig3
M01745_2.00 		Mus musculus
NWAHHATANNN
NNNTATDDTWN		 PBM
Weirauch et al.(2014)
pTH5164 		0.914 1.000
OLIG3
M02798_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG3_1 		0.914 1.000
OLIG3
M04175_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX 		0.914 1.000
OLIG3
M04171_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1 		0.914 1.000
OLIG3
M04172_2.00 		Homo sapiens
AACAKMTGBT
AVCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2 		0.914 1.000
OLIG3
M04176_2.00 		Homo sapiens
RMCATATGGY
RCCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX 		0.914 1.000
OLIG3
M04173_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
OLIG3
M04174_2.00 		Homo sapiens
VACAKMTGKY
RMCAKMTGTB		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
OLIG2
M02812_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_1 		0.894 0.964
OLIG2
M02813_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_2 		0.894 0.964
OLIG2
M04223_2.00 		Homo sapiens
AACAKMTGTB
VACAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1 		0.894 0.964
OLIG2
M04224_2.00 		Homo sapiens
AMCATATGKY
RMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2 		0.894 0.964
OLIG2
M08742_2.00 		Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B 		0.894 0.964
Olig2
M08771_2.00 		Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A 		0.894 0.964
Olig2
M09477_2.00 		Mus musculus
RVCAKMTGKH
DMCAKMTGBY		 Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882 		0.894 0.964
OLIG2
M04225_2.00 		Homo sapiens
AACAKMTGKB
VMCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1 		0.894 0.964
OLIG2
M04226_2.00 		Homo sapiens
AMCATATGKT
AMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2 		0.894 0.964
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R014889 bHLH 86 140

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10026 Aegilops tauschii F775_10026 I
BZIP17 Arabidopsis lyrata scaffold_402899.1 I
BZIP17 Arabidopsis thaliana AT2G40950 D
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I
BRADI1G19702 Brachypodium distachyon BRADI1G19702 I
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I
Bo4g012880 Brassica oleracea Bo4g012880 I
Bra023224 Brassica rapa Bra023224 I
Bra034147 Brassica rapa Bra034147 I
PK07115.1 Cannabis sativa PK07115.1 I
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I
Carubv10022722m.g Capsella rubella Carubv10022722m.g I
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I
Ca_08103 Cicer arietinum Ca_08103 I
Cla017717 Citrullus lanatus Cla017717 I
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I
Cucsa.337510 Cucumis sativus Cucsa.337510 I
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I
MLOC_42759 Hordeum vulgare MLOC_42759 I
MLOC_58500 Hordeum vulgare MLOC_58500 I
LPERR07G21050 Leersia perrieri LPERR07G21050 I
Lus10010440.g Linum usitatissimum Lus10010440.g I
Lus10012104.g Linum usitatissimum Lus10012104.g I
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I
MDP0000138811 Malus domestica MDP0000138811 I
MDP0000180785 Malus domestica MDP0000180785 I
MDP0000270677 Malus domestica MDP0000270677 I
MDP0000299504 Malus domestica MDP0000299504 I
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I
MTR_7g088890 Medicago truncatula MTR_7g088890 I
mgf013640m Mimulus guttatus mgf013640m I
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I
TGA1B_TOBAC Nicotiana tabacum TGA1B_TOBAC D
OBART07G24080 Oryza barthii OBART07G24080 I
OB07G29670 Oryza brachyantha OB07G29670 I
ORGLA07G0187400 Oryza glaberrima ORGLA07G0187400 I
OGLUM07G24220 Oryza glumaepatula OGLUM07G24220 I
BGIOSGA026248 Oryza indica BGIOSGA026248 I
OLONG_012651 Oryza longistaminata OLONG_012651 I
OMERI07G20490 Oryza meridionalis OMERI07G20490 I
ONIVA07G23980 Oryza nivara ONIVA07G23980 I
OPUNC07G22690 Oryza punctata OPUNC07G22690 I
ORUFI07G25260 Oryza rufipogon ORUFI07G25260 I
BZIP60 Oryza sativa OS07G0644100 I
Pavir.J09096 Panicum virgatum Pavir.J09096 I
Pavir.Ba00049 Panicum virgatum Pavir.Ba00049 I
e_gw1.25.198.1 Physcomitrella patens e_gw1.25.198.1 I
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I
Pm016493 Prunus mume Pm016493 I
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I
29940.m000398 Ricinus communis 29940.m000398 I
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I
Si029351m.g Setaria italica Si029351m.g I
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I
Sb02g041070 Sorghum bicolor Sb02g041070 I
TCM_023889 Theobroma cacao TCM_023889 I
Traes_2BS_169BEF991 Triticum aestivum Traes_2BS_169BEF991 I
Traes_2DS_5FA136FBB Triticum aestivum Traes_2DS_5FA136FBB I
TRIUR3_00571 Triticum urartu TRIUR3_00571 I
TRIUR3_02784 Triticum urartu TRIUR3_02784 I