CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.2236s0005
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.2236s0005
T049279_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.2236s0005.1.p
bHLH
47
95
CSRKAEREKLRRDKLKEQFLELGNALDPNRPKSDKVSILTDTIQMLKDV
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_221018
Agaricus bisporus
AGABI2DRAFT_221018
I
AMAG_11531
Allomyces macrogynus
AMAG_11531
I
AMAG_10934
Allomyces macrogynus
AMAG_10934
I
M378DRAFT_10526
Amanita muscaria
M378DRAFT_10526
I
CERSUDRAFT_154783
Ceriporiopsis subvermispora
CERSUDRAFT_154783
I
CC1G_03210
Coprinopsis cinerea
CC1G_03210
I
FOMPIDRAFT_1127908
Fomitopsis pinicola
FOMPIDRAFT_1127908
N
GALMADRAFT_535775
Galerina marginata
GALMADRAFT_535775
I
GLOTRDRAFT_137651
Gloeophyllum trabeum
GLOTRDRAFT_137651
N
M413DRAFT_24478
Hebeloma cylindrosporum
M413DRAFT_24478
I
gw1.3.368.1
Heterobasidion annosum
gw1.3.368.1
I
HETIRDRAFT_245864
Heterobasidion irregulare
HETIRDRAFT_245864
I
JAAARDRAFT_35522
Jaapia argillacea
JAAARDRAFT_35522
N
K443DRAFT_671242
Laccaria amethystina
K443DRAFT_671242
I
LACBIDRAFT_399488
Laccaria bicolor
LACBIDRAFT_399488
I
MELLADRAFT_118331
Melampsora laricipopulina
MELLADRAFT_118331
I
estExt_fgeneshMC_kg.C_60018
Mucor circinelloides
estExt_fgeneshMC_kg.C_60018
I
fgeneshMC_pm.9_#_186
Mucor circinelloides
fgeneshMC_pm.9_#_186
I
PAXRUDRAFT_830673
Paxillus rubicundulus
PAXRUDRAFT_830673
I
PHACADRAFT_258404
Phanerochaete carnosa
PHACADRAFT_258404
I
PHLGIDRAFT_76307
Phlebiopsis gigantea
PHLGIDRAFT_76307
I
fgeneshPB_pg.22__185
Phycomyces blakesleeanus
fgeneshPB_pg.22__185
I
fgeneshPB_pg.2__402
Phycomyces blakesleeanus
fgeneshPB_pg.2__402
I
PILCRDRAFT_94123
Piloderma croceum
PILCRDRAFT_94123
I
PIIN_00063
Piriformospora indica
PIIN_00063
N
PLEOSDRAFT_1083727
Pleurotus ostreatus
PLEOSDRAFT_1083727
I
POSPLDRAFT_113058
Postia placenta
POSPLDRAFT_113058
I
PSEUBRA_SCAF2g02944
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02944
I
PFL1_03021
Pseudozyma flocculosa
PFL1_03021
I
PHSY_000207
Pseudozyma hubeiensis
PHSY_000207
I
PGTG_09159
Puccinia graminis
PGTG_09159
D
PTTG_02951
Puccinia triticina
PTTG_02951
I
V565_004710
Rhizoctonia solani
V565_004710
I
GLOINDRAFT_38994
Rhizophagus irregularis
GLOINDRAFT_38994
I
RO3G_08081
Rhizopus oryzae
RO3G_08081
I
SCHCODRAFT_257622
Schizophyllum commune
SCHCODRAFT_257622
I
M408DRAFT_175095
Serendipita vermifera
M408DRAFT_175095
N
SERLA73DRAFT_72478
Serpula lacrymans
SERLA73DRAFT_72478
I
SPPG_09179
Spizellomyces punctatus
SPPG_09179
I
sr10662
Sporisorium reilianum
sr10662
I
CY34DRAFT_590075
Suillus luteus
CY34DRAFT_590075
I
BN946_scf184656.g9
Trametes cinnabarina
BN946_scf184656.g9
I
UHOR_02856
Ustilago hordei
UHOR_02856
N
UM01925
Ustilago maydis
UM01925
I