CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.5905s0007
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.5905s0007
T049311_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.5905s0007.1.p
bHLH
8
62
RQSSSTAPRISDDQMIDLVTKLRQILPEIGQRRRSDKVSASKVLQETCNYIRNLN
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRE1
Arabidopsis lyrata
scaffold_704049.1
N
0.528
Carubv10006122m.g
Capsella rubella
Carubv10006122m.g
N
0.914
Thhalv10028074m.g
Eutrema salsugineum
Thhalv10028074m.g
N
0.528