CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.005G139900
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.005G139900
T049972_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.005G139900.1
bHLH
19
60
DQITDLVSKLQHLIPELRRRRFDKVSTSKVLQETCNYIRSLH
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRE1
Arabidopsis lyrata
scaffold_704049.1
N
0.839
scaffold_500871.1
Arabidopsis lyrata
scaffold_500871.1
N
0.863
PRE5
Arabidopsis thaliana
AT3G28857
N
0.863
Bo2g146500
Brassica oleracea
Bo2g146500
N
0.863
Bo5g045280
Brassica oleracea
Bo5g045280
N
0.864
Bo6g063200
Brassica oleracea
Bo6g063200
N
0.840
Bo7g086990
Brassica oleracea
Bo7g086990
N
0.863
Bo9g008670
Brassica oleracea
Bo9g008670
N
0.863
Bra033063
Brassica rapa
Bra033063
N
0.863
Bra028443
Brassica rapa
Bra028443
N
0.840
Bra025358
Brassica rapa
Bra025358
N
0.864
Bra024672
Brassica rapa
Bra024672
N
0.888
Ciclev10033182m.g
Citrus clementina
Ciclev10033182m.g
N
0.871
Thhalv10005197m.g
Eutrema salsugineum
Thhalv10005197m.g
N
0.863
Thhalv10028074m.g
Eutrema salsugineum
Thhalv10028074m.g
N
0.839
Gorai.008G181800
Gossypium raimondii
Gorai.008G181800
N
0.871
Lus10036732.g
Linum usitatissimum
Lus10036732.g
N
0.874
Lus10037198.g
Linum usitatissimum
Lus10037198.g
N
0.862