CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10007502.g
(
Linum usitatissimum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Lus10007502.g
T050161_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK01630.1
M01118_2.00
Cannabis sativa
GCACGTGD
HCACGTGC
PBM
Lambert et al.(2019)
pTH11426
0.914
0.860
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10007502
bHLH
35
84
SSRSHSQAEKRRRDRINAQLSTLRKLIPKSDKMDKAALLGSVIEQVRDLK
Links
Other
bHLH
family TFs
Other
Linum usitatissimum
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_063340
Acremonium chrysogenum
ACRE_063340
I
0.000
AOL_s00215g23
Arthrobotrys oligospora
AOL_s00215g23
I
0.000
M437DRAFT_69578
Aureobasidium melanogenum
M437DRAFT_69578
I
0.000
M438DRAFT_301560
Aureobasidium pullulans
M438DRAFT_301560
I
0.000
AUEXF2481DRAFT_200794
Aureobasidium subglaciale
AUEXF2481DRAFT_200794
I
0.000
BAUCODRAFT_123202
Baudoinia compniacensis
BAUCODRAFT_123202
I
0.000
COCC4DRAFT_82054
Bipolaris maydis
COCC4DRAFT_82054
I
0.000
COCMIDRAFT_79558
Bipolaris oryzae
COCMIDRAFT_79558
I
0.000
COCSADRAFT_84232
Bipolaris sorokiniana
COCSADRAFT_84232
I
0.000
COCVIDRAFT_30945
Bipolaris victoriae
COCVIDRAFT_30945
I
0.000
Bcin01g01680
Botrytis cinerea
Bcin01g01680
I
0.000
CHGG_04631
Chaetomium globosum
CHGG_04631
I
0.000
estExt_Genewise1Plus.C_160056
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_160056
I
0.000
CFIO01_00459
Colletotrichum fioriniae
CFIO01_00459
I
0.000
CGGC5_12311
Colletotrichum gloeosporioides
CGGC5_12311
I
0.000
GLRG_08331
Colletotrichum graminicola
GLRG_08331
I
0.000
CH063_09856
Colletotrichum higginsianum
CH063_09856
I
0.000
Cob_10480
Colletotrichum orbiculare
Cob_10480
I
0.000
CSUB01_02028
Colletotrichum sublineola
CSUB01_02028
I
0.000
estExt_fgenesh1_pg.C_30644
Cryphonectria parasitica
estExt_fgenesh1_pg.C_30644
I
0.000
H072_3680
Dactylellina haptotyla
H072_3680
I
0.000
DOTSEDRAFT_73058
Dothistroma septosporum
DOTSEDRAFT_73058
I
0.000
DRE_03937
Drechslerella stenobrocha
DRE_03937
I
0.000
UCREL1_3643
Eutypa lata
UCREL1_3643
I
0.000
A1O9_06885
Exophiala aquamarina
A1O9_06885
I
0.000
FFUJ_05056
Fusarium fujikuroi
FFUJ_05056
I
0.000
FGRRES_17645
Fusarium graminearum
FGRRES_17645
I
0.000
FOXG_08626
Fusarium oxysporum
FOXG_08626
I
0.000
FPSE_04959
Fusarium pseudograminearum
FPSE_04959
I
0.000
NechaG32419
Fusarium solani
NechaG32419
I
0.000
FVEG_06046
Fusarium verticillioides
FVEG_06046
I
0.000
GGTG_02776
Gaeumannomyces graminis
GGTG_02776
I
0.000
CMQ_3812
Grosmannia clavigera
CMQ_3812
I
0.000
LEMA_P007120.1
Leptosphaeria maculans
LEMA_P007120.1
I
0.000
MPH_13649
Macrophomina phaseolina
MPH_13649
I
0.000
MGG_01734
Magnaporthe oryzae
MGG_01734
I
0.000
MAPG_01726
Magnaporthe poae
MAPG_01726
I
0.000
MBM_07850
Marssonina brunnea
MBM_07850
I
0.000
MBR_00455
Metarhizium brunneum
MBR_00455
I
0.000
MGU_01088
Metarhizium guizhouense
MGU_01088
I
0.000
MAJ_01818
Metarhizium majus
MAJ_01818
I
0.000
MYCTH_2298863
Myceliophthora thermophila
MYCTH_2298863
I
0.000
estExt_fgenesh1_pm.C_chr_60224
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_60224
I
0.000
e_gw1.18.1708.1
Nectria haematococca
e_gw1.18.1708.1
I
0.000
UCRNP2_7317
Neofusicoccum parvum
UCRNP2_7317
I
0.000
clr-1
Neurospora crassa
NCU07705
D
0.000
estExt_Genewise1.C_31390
Neurospora discreta
estExt_Genewise1.C_31390
I
0.000
NEUTE1DRAFT_78712
Neurospora tetrasperma
NEUTE1DRAFT_78712
I
0.000
OIDMADRAFT_109343
Oidiodendron maius
OIDMADRAFT_109343
I
0.000
F503_05241
Ophiostoma piceae uamh
F503_05241
I
0.000
PFICI_04537
Pestalotiopsis fici
PFICI_04537
I
0.000
PODANS_6_2840
Podospora anserina
PODANS_6_2840
I
0.000
V499_08273
Pseudogymnoascus pannorum
V499_08273
I
0.000
PTT_14843
Pyrenophora teres
PTT_14843
I
0.000
SAPIO_CDS7108
Scedosporium apiospermum
SAPIO_CDS7108
I
0.000
SBOR_2384
Sclerotinia borealis
SBOR_2384
I
0.000
SS1G_13144
Sclerotinia sclerotiorum
SS1G_13144
I
0.000
SETTUDRAFT_20488
Setosphaeria turcica
SETTUDRAFT_20488
I
0.000
SMAC_00847
Sordaria macrospora
SMAC_00847
I
0.000
SEPMUDRAFT_163837
Sphaerulina musiva
SEPMUDRAFT_163837
I
0.000
SPBR_01382
Sporothrix brasiliensis
SPBR_01382
I
0.000
HMPREF1624_03268
Sporothrix schenckii
HMPREF1624_03268
I
0.000
S40288_06279
Stachybotrys chartarum
S40288_06279
I
0.000
S40285_00264
Stachybotrys chlorohalonata
S40285_00264
I
0.000
SNOG_03108
Stagonospora nodorum
SNOG_03108
I
0.000
THITE_2115249
Thielavia terrestris
THITE_2115249
I
0.000
VHEMI03626
Torrubiella hemipterigena
VHEMI03626
I
0.000
PV09_03439
Verruconis gallopava
PV09_03439
I
0.000
VDBG_00821
Verticillium albo atrum
VDBG_00821
I
0.000
VDBG_00821
Verticillium alfalfae
VDBG_00821
I
0.000
VDAG_00432
Verticillium dahliae
VDAG_00432
I
0.000
Mycgr3G100535
Zymoseptoria tritici
Mycgr3G100535
I
0.000