Pavir.Ab00172 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ab00172 T050656_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab00172.1.p bHLH 69 120

Links

Other bHLH family TFs
Other Panicum virgatum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00029p00112130 Amborella trichopoda AMTR_s00029p00112130 N 0.845
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.842
GLYMA13G36260 Glycine max GLYMA13G36260 I 0.842
GLYMA15G06803 Glycine max GLYMA15G06803 I 0.861
GLYMA15G06860 Glycine max GLYMA15G06860 I 0.861
LPERR02G01020 Leersia perrieri LPERR02G01020 N 0.885
GSMUA_Achr8G33180_001 Musa acuminata GSMUA_Achr8G33180_001 I 0.874
OBART02G01220 Oryza barthii OBART02G01220 N 0.912
ORGLA02G0011200 Oryza glaberrima ORGLA02G0011200 N 0.912
OGLUM02G01100 Oryza glumaepatula OGLUM02G01100 N 0.912
BGIOSGA007247 Oryza indica BGIOSGA007247 N 0.912
OLONG_000275 Oryza longistaminata OLONG_000275 N 0.912
OMERI02G00630 Oryza meridionalis OMERI02G00630 N 0.912
ONIVA02G01100 Oryza nivara ONIVA02G01100 N 0.912
OPUNC02G00650 Oryza punctata OPUNC02G00650 N 0.912
ORUFI02G01220 Oryza rufipogon ORUFI02G01220 N 0.912
OS02G0116600 Oryza sativa OS02G0116600 N 0.912
Pavir.Aa03509 Panicum virgatum Pavir.Aa03509 N 0.903
Pavir.Ab02693 Panicum virgatum Pavir.Ab02693 N 0.890
PDK_20s1322801g004 Phoenix dactylifera PDK_20s1322801g004 N 0.845
Si018232m.g Setaria italica Si018232m.g N 0.914
Sb04g001200 Sorghum bicolor Sb04g001200 N 0.879
GRMZM5G856837 Zea mays GRMZM5G856837 N 0.879
GRMZM2G314882 Zea mays GRMZM2G314882 N 0.879