CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10004458m.g
(
Eutrema salsugineum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Thhalv10004458m.g
T051185_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH72
M06743_2.00
Arabidopsis thaliana
VCACGTGGSHHHHNS
SNDDDDSCCACGTGB
Dap-seq
OMalley et al.(2016)
PIF7_col_a
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004458m
bHLH
167
215
AAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQ
Links
Other
bHLH
family TFs
Other
Eutrema salsugineum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB01954.1
Alternaria brassicicola
AB01954.1
N
COCC4DRAFT_72266
Bipolaris maydis
COCC4DRAFT_72266
N
COCMIDRAFT_82445
Bipolaris oryzae
COCMIDRAFT_82445
N
COCSADRAFT_192712
Bipolaris sorokiniana
COCSADRAFT_192712
N
COCVIDRAFT_12735
Bipolaris victoriae
COCVIDRAFT_12735
N
COCCADRAFT_23332
Bipolaris zeicola
COCCADRAFT_23332
N
SNOG_08459
Phaeosphaeria nodorum
SNOG_08459
N
PTT_06215
Pyrenophora teres
PTT_06215
N
PTRG_08409
Pyrenophora triticirepentis
PTRG_08409
N
SETTUDRAFT_96644
Setosphaeria turcica
SETTUDRAFT_96644
N
SNOG_08459
Stagonospora nodorum
SNOG_08459
N