CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BHLH72
(
Arabidopsis thaliana
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AT5G61270
T030715_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH72
M06743_2.00
Arabidopsis thaliana
VCACGTGGSHHHHNS
SNDDDDSCCACGTGB
Dap-seq
OMalley et al.(2016)
PIF7_col_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G61270.1
bHLH
168
216
AAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQ
AT5G61270.2
bHLH
80
128
AAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQ
AT5G61270.3
bHLH
80
128
AAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQ
Links
Other
bHLH
family TFs
Other
Arabidopsis thaliana
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra012972
Brassica rapa
Bra012972
I
0.914
PIF7
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002119
I
0.914
Bostr.26833s0112
Boechera stricta
Bostr.26833s0112
I
0.914
Cagra.0542s0021
Capsella grandiflora
Cagra.0542s0021
I
0.914
Carubv10027660m.g
Capsella rubella
Carubv10027660m.g
I
0.914
Thhalv10004458m.g
Eutrema salsugineum
Thhalv10004458m.g
I
0.914
Bo7g098470
Brassica oleracea
Bo7g098470
I
0.890