XP_002937284 (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XP_002937284 T051964_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atoh1
M01754_2.00 		Mus musculus
NMCATATGKN
NMCATATGKN		 PBM
Weirauch et al.(2014)
pTH5074 		0.914 1.000
Atoh1
M02820_2.00 		Mus musculus
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
Atoh1_1 		0.914 1.000
ATOH1
M04166_2.00 		Homo sapiens
RACAGCTGYY
RRCAGCTGTY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1 		0.914 1.000
ATOH1
M04167_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2 		0.914 1.000
ATOH1
M08738_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B 		0.914 1.000
Atoh1
M08779_2.00 		Mus musculus
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B 		0.914 1.000
Atoh1
M09480_2.00 		Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN		 Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111 		0.914 1.000
ATOH1
M09877_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MATH1_Q2 		0.914 1.000
ATOH1
M04168_2.00 		Homo sapiens
AACAGCTGTY
RACAGCTGTT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
ATOH1
M04169_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002937284 bHLH 108 160

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013892 Ailuropoda melanoleuca ENSAMEG00000013892 I
ENSBTAP00000031815-D1 Bos grunniens ENSBTAP00000031815-D1 I
IRF3 Bos taurus ENSBTAG00000006633 I
IRF3 Callithrix jacchus ENSCJAG00000003637 I
IRF3 Canis familiaris ENSCAFG00000003594 I
IRF3 Cavia porcellus ENSCPOG00000026146 I
ENSCSAG00000002477 Chlorocebus sabaeus ENSCSAG00000002477 I
IRF3 Dasypus novemcinctus ENSDNOG00000040858 I
IRF3 Equus caballus ENSECAG00000018265 I
IRF3 Felis catus ENSFCAG00000006074 I
IRF3 Gorilla gorilla ENSGGOG00000000499 I
IRF3 Homo sapiens ENSG00000126456 D
ENSSTOG00000022900 Ictidomys tridecemlineatus ENSSTOG00000022900 I
IRF3 Loxodonta africana ENSLAFG00000028074 I
ENSMMUP00000031524 Macaca fascicularis ENSMMUP00000031524 I
IRF3 Macaca mulatta ENSMMUG00000022735 I
ENSMEUG00000004666 Macropus eugenii ENSMEUG00000004666 I
IRF3 Microcebus murinus ENSMICG00000001752 I
ENSMPUG00000002477 Mustela putorius furo ENSMPUG00000002477 I
Irf3 Mus musculus ENSMUSG00000003184 D
Myotis_brandtii_IRF3_10017659 Myotis brandtii Myotis_brandtii_IRF3_10017659 I
IRF3 Myotis lucifugus ENSMLUG00000023427 I
ENSNLEG00000005277 Nomascus leucogenys ENSNLEG00000005277 I
IRF3 Ochotona princeps ENSOPRG00000001971 I
IRF3 Oryctolagus cuniculus ENSOCUG00000027558 I
IRF3 Otolemur garnettii ENSOGAG00000011935 I
ENSPTRG00000011309 Pan troglodytes ENSPTRG00000011309 I
ENSPANG00000014697 Papio anubis ENSPANG00000014697 I
ENSPPYG00000010260 Pongo abelii ENSPPYG00000010260 I
IRF3 Procavia capensis ENSPCAG00000008633 I
IRF3 Pteropus vampyrus ENSPVAG00000010968 I
Irf3 Rattus norvegicus ENSRNOG00000043388 I
IRF3 Sorex araneus ENSSARG00000006248 I
IRF3 Sus scrofa ENSSSCG00000003178 I
ENSTBEG00000003466 Tupaia belangeri ENSTBEG00000003466 I
IRF3 Tursiops truncatus ENSTTRG00000005531 I