CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGLB008796
(
Biomphalaria glabrata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
BGLB008796
T053134_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Fer3
M05993_2.00
Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC
B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937
0.888
0.846
FERD3L
M04140_2.00
Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1
0.864
0.788
FERD3L
M04141_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2
0.864
0.788
FERD3L
M04142_2.00
Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1
0.864
0.788
FERD3L
M04143_2.00
Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC
SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2
0.864
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB008796-PA
bHLH
133
185
QRRAANVRERRRMYNLNEAFDNLRQRIPTFAYEKRLSRIETLRLAISYIAFMA
Links
Other
bHLH
family TFs
Other
Biomphalaria glabrata
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000013226
Anas platyrhynchos
ENSAPLG00000013226
I
0.000
ENSBTAP00000010351-D1
Bos grunniens
ENSBTAP00000010351-D1
I
0.000
STAT1
Bos taurus
ENSBTAG00000007867
I
0.000
STAT1
Callithrix jacchus
ENSCJAG00000005819
I
0.000
ENSCAFG00000009797
Canis familiaris
ENSCAFG00000009797
I
0.000
ENSCSAG00000012191
Chlorocebus sabaeus
ENSCSAG00000012191
I
0.000
STAT1
Dasypus novemcinctus
ENSDNOG00000007325
I
0.000
STAT1
Echinops telfairi
ENSETEG00000017040
I
0.000
STAT1
Equus caballus
ENSECAG00000009039
I
0.000
STAT1
Felis catus
ENSFCAG00000013725
I
0.000
ENSFALG00000004349
Ficedula albicollis
ENSFALG00000004349
I
0.000
ENSGMOG00000012431
Gadus morhua
ENSGMOG00000012431
I
0.000
STAT1
Gallus gallus
ENSGALG00000007651
I
0.000
STAT1
Gorilla gorilla
ENSGGOG00000000611
I
0.000
STAT1
Homo sapiens
ENSG00000115415
D
0.000
ENSSTOG00000008620
Ictidomys tridecemlineatus
ENSSTOG00000008620
I
0.000
ENSLACG00000006815
Latimeria chalumnae
ENSLACG00000006815
I
0.000
ENSLOCG00000009965
Lepisosteus oculatus
ENSLOCG00000009965
I
0.000
STAT1
Loxodonta africana
ENSLAFG00000001475
I
0.000
STAT1
Macaca mulatta
ENSMMUG00000005613
I
0.000
STAT1
Meleagris gallopavo
ENSMGAG00000006382
I
0.000
STAT1
Microcebus murinus
ENSMICG00000002941
I
0.000
STAT1
Monodelphis domestica
ENSMODG00000011747
I
0.000
ENSMPUG00000012530
Mustela putorius furo
ENSMPUG00000012530
I
0.000
Stat1
Mus musculus
ENSMUSG00000026104
D
0.000
ENSNLEG00000006694
Nomascus leucogenys
ENSNLEG00000006694
I
0.000
STAT1
Ochotona princeps
ENSOPRG00000008589
I
0.000
ENSONIG00000012194
Oreochromis niloticus
ENSONIG00000012194
I
0.000
STAT1
Oryctolagus cuniculus
ENSOCUG00000002455
I
0.000
STAT1
Otolemur garnettii
ENSOGAG00000003038
I
0.000
ENSOARG00000013903
Ovis aries
ENSOARG00000013903
I
0.000
STAT1
Pan troglodytes
ENSPTRG00000012749
I
0.000
ENSPANG00000017818
Papio anubis
ENSPANG00000017818
I
0.000
ENSPSIG00000010185
Pelodiscus sinensis
ENSPSIG00000010185
I
0.000
ENSPMAG00000002770
Petromyzon marinus
ENSPMAG00000002770
I
0.000
ENSPPYG00000013027
Pongo abelii
ENSPPYG00000013027
I
0.000
STAT1
Pteropus vampyrus
ENSPVAG00000004735
I
0.000
Stat1
Rattus norvegicus
ENSRNOG00000014079
I
0.000
ENSSHAG00000016913
Sarcophilus harrisii
ENSSHAG00000016913
I
0.000
STAT1
Sus scrofa
ENSSSCG00000016057
I
0.000
stat1a
Tetraodon nigroviridis
ENSTNIG00000017161
I
0.000
STAT1
Tursiops truncatus
ENSTTRG00000001134
I
0.000
stat1.L
Xenopus laevis
XB-GENE-864837
I
0.000
stat1
Xenopus tropicalis
XB-GENE-482166
I
0.000
ENSXMAG00000001594
Xiphophorus maculatus
ENSXMAG00000001594
I
0.000