stat1a (Tetraodon nigroviridis)
STAT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02864 (STAT_bind) IPR013801 ENSTNIG00000017161 T337703_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STAT1
M08171_2.00 		Homo sapiens
HTTCCYRGAAV
BTTCYRGGAAD		 ChIP-seq
Mathelier et al.(2014)
MA0137.3 		0.701 0.701
STAT1
M08013_2.00 		Homo sapiens
NBBNBTTCCHRGAADNSHNNN
NNNDSNHTTCYDGGAAVNVVN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT1_Stanford 		0.701 0.701
STAT1
M08014_2.00 		Homo sapiens
YTTCCYRGAAR
YTTCYRGGAAR		 ChIP-seq
Gerstein et al.(2012)
K562_STAT1_Stanford 		0.701 0.701
STAT1
M08229_2.00 		Homo sapiens
NTTCYNRGAA
TTCYNRGAAN		 ChIP-seq
Contrino et al.(2012)
Mv124 		0.701 0.701
STAT1
M08230_2.00 		Homo sapiens
RGTTTCRBTT
AAVYGAAACY		 ChIP-seq
Contrino et al.(2012)
Mv125 		0.701 0.701
STAT1
M09411_2.00 		Homo sapiens
HBHNYTTCCNRGAARHSHN
NDSDYTTCYNGGAARNDVD		 Misc
Kulakovskiy et al.(2013)
STAT1_HUMAN.H11MO.0.A 		0.701 0.701
STAT1
M09642_2.00 		Homo sapiens
NHTTCYNRGAADNN
NNHTTCYNRGAADN		 Misc
Heinz et al.(2010)
HelaS3-STAT1_GSE12782 		0.701 0.701
STAT1
M11348_2.00 		Homo sapiens
NSNYAHTTCCSGGAADBBNHV
BDNVVHTTCCSGGAADTRNSN		 Transfac
Matys et al.(2006)
V$STAT1_01 		0.701 0.701
STAT1
M11349_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_02 		0.701 0.701
STAT1
M11350_2.00 		Homo sapiens
VNHTTMBN
NVKAADNB		 Transfac
Matys et al.(2006)
V$STAT1_03 		0.701 0.701
STAT1
M11351_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_05 		0.701 0.701
STAT1
M11352_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_07 		0.701 0.701
STAT1
M11353_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_Q4 		0.701 0.701
STAT1
M11354_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_Q6 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000001654 STAT 315 564
ENSTNIP00000002227 STAT 315 564
ENSTNIP00000020297 STAT 315 564

Links

Other STAT family TFs
Other Tetraodon nigroviridis TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
stat1a Takifugu rubripes ENSTRUG00000000102 N 0.962
ENSONIG00000012194 Oreochromis niloticus ENSONIG00000012194 I 0.936
stat1a Gasterosteus aculeatus ENSGACG00000015589 I 0.910
ENSXMAG00000001594 Xiphophorus maculatus ENSXMAG00000001594 I 0.906
stat1a Oryzias latipes ENSORLG00000000162 N 0.880
ENSGMOG00000012431 Gadus morhua ENSGMOG00000012431 I 0.829
ENSPFOG00000006778 Poecilia formosa ENSPFOG00000006778 N 0.816
ENSTNIG00000019687 Tetraodon nigroviridis ENSTNIG00000019687 I 0.778
STAT1 Monodelphis domestica ENSMODG00000011747 I 0.710
ENSLOCG00000009965 Lepisosteus oculatus ENSLOCG00000009965 I 0.709
STAT1 Tursiops truncatus ENSTTRG00000001134 I 0.709
STAT1 Gallus gallus ENSGALG00000007651 I 0.702
ENSSHAG00000016913 Sarcophilus harrisii ENSSHAG00000016913 I 0.702
ENSPSIG00000010185 Pelodiscus sinensis ENSPSIG00000010185 I 0.701
ENSCAFG00000009797 Canis familiaris ENSCAFG00000009797 I 0.700
ENSMPUG00000012530 Mustela putorius furo ENSMPUG00000012530 I 0.700