Bra040260 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra040260 T057534_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.884 0.935
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.884 0.935
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.812 0.694
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.805 0.758
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.805 0.758
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.805 0.758
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.805 0.758
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.794 0.677
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.794 0.677
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.794 0.677
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.794 0.677
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.794 0.677
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.794 0.677
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.788 0.581
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.788 0.581
DPBF3
M01133_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Lambert et al.(2019)
pTH11531 		0.786 0.581
DPBF3
M01058_2.00 		Arabidopsis thaliana
HBACGTGKM
KMCACGTVD		 PBM
Sullivan et al.(2014)
pTH7219 		0.786 0.581
DPBF3
M01059_2.00 		Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7547 		0.786 0.581
DPBF3
M06777_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_colamp_a 		0.786 0.581
DPBF3
M06778_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_col_v31 		0.786 0.581
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra040260.1-P bZIP 285 346

Links

Other bZIP family TFs
Other Brassica rapa TFs

366 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_013080 Acremonium chrysogenum ACRE_013080 I
ARB_05956 Arthroderma benhamiae ARB_05956 I
MCYG_02695 Arthroderma otae MCYG_02695 I
e_gw1.00710.230.1 Aspergillus carbonarius e_gw1.00710.230.1 I
ACLA_055970 Aspergillus clavatus CADACLAG00005179 I
CADAFLAG00008024 Aspergillus flavus CADAFLAG00008024 I
AFUA_4G02940 Aspergillus fumigatus CADAFUAG00001401 I
ANIA_10378 Aspergillus nidulans CADANIAG00009880 D
CADANGAG00011236 Aspergillus niger CADANGAG00011236 I
CADAORAG00000177 Aspergillus oryzae CADAORAG00000177 I
EURHEDRAFT_411156 Aspergillus ruber EURHEDRAFT_411156 I
ATEG_07901 Aspergillus terreus CADATEAG00000497 I
M437DRAFT_18084 Aureobasidium melanogenum M437DRAFT_18084 I
AUEXF2481DRAFT_4094 Aureobasidium subglaciale AUEXF2481DRAFT_4094 I
BAUCODRAFT_269899 Baudoinia compniacensis BAUCODRAFT_269899 I
BBA_00488 Beauveria bassiana BBA_00488 I
COCC4DRAFT_40407 Bipolaris maydis COCC4DRAFT_40407 I
COCMIDRAFT_33369 Bipolaris oryzae COCMIDRAFT_33369 I
COCSADRAFT_97657 Bipolaris sorokiniana COCSADRAFT_97657 I
COCVIDRAFT_17332 Bipolaris victoriae COCVIDRAFT_17332 I
COCCADRAFT_6984 Bipolaris zeicola COCCADRAFT_6984 I
BDDG_07691 Blastomyces dermatitidis BDDG_07691 I
BGHDH14_bgh03757 Blumeria graminis BGHDH14_bgh03757 I
A1O1_02576 Capronia coronata A1O1_02576 I
A1O3_05449 Capronia epimyces A1O3_05449 I
PV04_09319 Capronia semiimmersa PV04_09319 I
CTHT_0032650 Chaetomium thermophilum CTHT_0032650 I
Z519_08509 Cladophialophora bantiana Z519_08509 I
G647_07711 Cladophialophora carrionii G647_07711 I
PV07_00488 Cladophialophora immunda PV07_00488 I
A1O5_01242 Cladophialophora psammophila A1O5_01242 I
A1O7_08736 Cladophialophora yegresii A1O7_08736 I
CPUR_06057 Claviceps purpurea CPUR_06057 I
CIMG_08892 Coccidioides immitis CIMG_08892 I
CPC735_064040 Coccidioides posadasii CPC735_064040 I
fgenesh1_kg.C_scaffold_5000057 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_5000057 I
CFIO01_07847 Colletotrichum fioriniae CFIO01_07847 I
CGGC5_1206 Colletotrichum gloeosporioides CGGC5_1206 I
GLRG_02817 Colletotrichum graminicola GLRG_02817 I
CH063_13592 Colletotrichum higginsianum CH063_13592 I
Cob_10575 Colletotrichum orbiculare Cob_10575 I
CSUB01_02829 Colletotrichum sublineola CSUB01_02829 I
W97_04573 Coniosporium apollinis W97_04573 I
CCM_04263 Cordyceps militaris CCM_04263 I
estExt_fgenesh1_pm.C_30735 Cryphonectria parasitica estExt_fgenesh1_pm.C_30735 I
HMPREF1541_04204 Cyphellophora europaea HMPREF1541_04204 I
DOTSEDRAFT_73911 Dothistroma septosporum DOTSEDRAFT_73911 I
EPUS_01825 Endocarpon pusillum EPUS_01825 I
EV44_g4901 Erysiphe necator EV44_g4901 I
A1O9_12266 Exophiala aquamarina A1O9_12266 I
HMPREF1120_07358 Exophiala dermatitidis HMPREF1120_07358 I
PV10_04959 Exophiala mesophila PV10_04959 I
PV06_05138 Exophiala oligosperma PV06_05138 I
PV11_02396 Exophiala sideris PV11_02396 I
PV08_09059 Exophiala spinifera PV08_09059 I
PV05_00805 Exophiala xenobiotica PV05_00805 I
Z517_01506 Fonsecaea pedrosoi Z517_01506 I
FFUJ_04663 Fusarium fujikuroi FFUJ_04663 I
FGRRES_09832 Fusarium graminearum FGRRES_09832 I
FOXG_08221 Fusarium oxysporum FOXG_08221 I
FPSE_10348 Fusarium pseudograminearum FPSE_10348 I
NechaG76538 Fusarium solani NechaG76538 I
FVEG_06450 Fusarium verticillioides FVEG_06450 I
GGTG_08387 Gaeumannomyces graminis GGTG_08387 I
M7I_6846 Glarea lozoyensis M7I_6846 I
CMQ_2549 Grosmannia clavigera CMQ_2549 I
HCBG_08448 Histoplasma capsulatum HCBG_08448 I
LEMA_P075830.1 Leptosphaeria maculans LEMA_P075830.1 I
MPH_02812 Macrophomina phaseolina MPH_02812 I
MGG_06131 Magnaporthe oryzae MGG_06131 I
MBM_06253 Marssonina brunnea MBM_06253 I
MAC_06402 Metarhizium acridum MAC_06402 I
MAM_03966 Metarhizium album MAM_03966 I
MANI_020708 Metarhizium anisopliae MANI_020708 I
MBR_00309 Metarhizium brunneum MBR_00309 I
MGU_01258 Metarhizium guizhouense MGU_01258 I
MAJ_07228 Metarhizium majus MAJ_07228 I
X797_002671 Metarhizium robertsii X797_002671 I
MCYG_02695 Microsporum canis MCYG_02695 I
MGYG_08430 Microsporum gypseum MGYG_08430 I
MYCTH_2299061 Myceliophthora thermophila MYCTH_2299061 I
UCRNP2_2391 Neofusicoccum parvum UCRNP2_2391 I
NFIA_030610 Neosartorya fischeri CADNFIAG00002762 I
NCU06399 Neurospora crassa NCU06399 D
scaffold_3-snap.528.1 Neurospora discreta scaffold_3-snap.528.1 I
NEUTE1DRAFT_121024 Neurospora tetrasperma NEUTE1DRAFT_121024 I
OCS_02153 Ophiocordyceps sinensis OCS_02153 I
F503_08759 Ophiostoma piceae uamh F503_08759 I
PAAG_01597 Paracoccidioides sp lutzii PAAG_01597 I
Pc12g13890 Penicillium chrysogenum Pc12g13890 I
PDIP_77620 Penicillium digitatum PDIP_77620 I
PEX1_065040 Penicillium expansum PEX1_065040 I
PITC_048290 Penicillium italicum PITC_048290 I
PMAA_006130 Penicillium marneffei PMAA_006130 I
PDE_01297 Penicillium oxalicum PDE_01297 I
PCH_Pc12g13890 Penicillium rubens PCH_Pc12g13890 I
U727_0043258041 Penicillium solitum U727_0043258041 I
PFICI_05721 Pestalotiopsis fici PFICI_05721 I
SNOG_08036 Phaeosphaeria nodorum SNOG_08036 I
PODANS_3_4790 Podospora anserina PODANS_3_4790 I
PTT_12277 Pyrenophora teres PTT_12277 I
PTRG_08316 Pyrenophora triticirepentis PTRG_08316 I
Z518_05180 Rhinocladiella mackenziei Z518_05180 I
SAPIO_CDS7180 Scedosporium apiospermum SAPIO_CDS7180 I
SS1G_13065 Sclerotinia sclerotiorum SS1G_13065 I
SETTUDRAFT_96438 Setosphaeria turcica SETTUDRAFT_96438 I
SMAC_00955 Sordaria macrospora SMAC_00955 I
SEPMUDRAFT_150066 Sphaerulina musiva SEPMUDRAFT_150066 I
SPBR_00166 Sporothrix brasiliensis SPBR_00166 I
HMPREF1624_06072 Sporothrix schenckii HMPREF1624_06072 I
S40288_05306 Stachybotrys chartarum S40288_05306 I
S40285_06955 Stachybotrys chlorohalonata S40285_06955 I
SNOG_08036 Stagonospora nodorum SNOG_08036 I
PMAA_006130 Talaromyces marneffei PMAA_006130 I
TSTA_104870 Talaromyces stipitatus TSTA_104870 I
THITE_2115495 Thielavia terrestris THITE_2115495 I
VHEMI03455 Torrubiella hemipterigena VHEMI03455 I
TRIATDRAFT_168746 Trichoderma atroviride TRIATDRAFT_168746 I
TRIREDRAFT_41573 Trichoderma reesei TRIREDRAFT_41573 I
TRIVIDRAFT_192202 Trichoderma virens TRIVIDRAFT_192202 I
H102_02845 Trichophyton rubrum H102_02845 I
H105_02864 Trichophyton soudanense H105_02864 I
TRV_07458 Trichophyton verrucosum TRV_07458 I
GSTUM_00012070001 Tuber melanosporum GSTUM_00012070001 I
UREG_02800 Uncinocarpus reesii UREG_02800 I
UV8b_314 Ustilaginoidea virens UV8b_314 I
PV09_01316 Verruconis gallopava PV09_01316 I
VDAG_08933 Verticillium dahliae VDAG_08933 I