POPTR_0005s05470 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0005s05470 T066951_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.814 0.833
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.814 0.833
estExt_Genewise1.C_2060077
M01832_2.00 		Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666 		0.804 0.733
BZIP63
M01787_2.00 		Arabidopsis thaliana
NNNWSACGTGKN
NMCACGTSWNNN		 PBM
Weirauch et al.(2014)
pTH7300 		0.794 0.700
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.787 0.867
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s05470.1 bZIP 177 236

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.786
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.795
BZIP63 Arabidopsis thaliana AT5G28770 D 0.794
Bostr.25517s0001 Boechera stricta Bostr.25517s0001 I 0.793
Bo2g151850 Brassica oleracea Bo2g151850 I 0.798
Bra010010 Brassica rapa Bra010010 I 0.783
PK05128.1 Cannabis sativa PK05128.1 D 0.787
Cagra.5456s0001 Capsella grandiflora Cagra.5456s0001 I 0.794
Carubv10001450m.g Capsella rubella Carubv10001450m.g I 0.794
Ca_03753 Cicer arietinum Ca_03753 I 0.787
Ca_01234 Cicer arietinum Ca_01234 I 0.818
Cla020112 Citrullus lanatus Cla020112 I 0.793
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.791
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.798
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.798
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.798
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.793
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.810
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.798
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.798
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.805
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.798
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.805
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.787
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.787
Gorai.001G000600 Gossypium raimondii Gorai.001G000600 I 0.784
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.793
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.801
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.793
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I 0.811
MDP0000270365 Malus domestica MDP0000270365 I 0.785
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I 0.819
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.799
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.809
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.816
mgf012838m Mimulus guttatus mgf012838m I 0.787
mgf009803m Mimulus guttatus mgf009803m I 0.796
mgf004063m Mimulus guttatus mgf004063m N 0.789
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.798
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.787
OBART12G18120 Oryza barthii OBART12G18120 I 0.799
OB02G14920 Oryza brachyantha OB02G14920 I 0.796
OB02G19520 Oryza brachyantha OB02G19520 I 0.796
OB12G24740 Oryza brachyantha OB12G24740 I 0.785
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.799
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.799
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.799
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.791
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.799
OS12G0601800 Oryza sativa OS12G0601800 I 0.799
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.814
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D 0.804
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I 0.789
POPTR_0006s29250 Populus trichocarpa POPTR_0006s29250 I 0.786
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.798
Pm003522 Prunus mume Pm003522 I 0.804
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I 0.819
29598.m000468 Ricinus communis 29598.m000468 I 0.796
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.798
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.800
SELMODRAFT_270282 Selaginella moellendorffii SELMODRAFT_270282 I 0.798
SELMODRAFT_439017 Selaginella moellendorffii SELMODRAFT_439017 I 0.798
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.798
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.798
TCM_026349 Theobroma cacao TCM_026349 I 0.800
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.798