Solyc04g078840.2 (Solanum lycopersicum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Solyc04g078840.2 T068213_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.814 0.879
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.814 0.879
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.811 0.759
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.811 0.810
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.811 0.810
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.811 0.810
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.811 0.810
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.805 0.690
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.805 0.690
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.795 0.672
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.795 0.672
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.795 0.672
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.795 0.672
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.795 0.672
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.795 0.672
DPBF3
M01133_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Lambert et al.(2019)
pTH11531 		0.789 0.621
DPBF3
M01058_2.00 		Arabidopsis thaliana
HBACGTGKM
KMCACGTVD		 PBM
Sullivan et al.(2014)
pTH7219 		0.789 0.621
DPBF3
M01059_2.00 		Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7547 		0.789 0.621
DPBF3
M06777_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_colamp_a 		0.789 0.621
DPBF3
M06778_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_col_v31 		0.789 0.621
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g078840.2.1 bZIP 367 424

Links

Other bZIP family TFs
Other Solanum lycopersicum TFs

367 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019054 Ailuropoda melanoleuca ENSAMEG00000019054 I
Alligator_sinensis_CCG005176.1 Alligator sinensis Alligator_sinensis_CCG005176.1 I
ENSAPLG00000002204 Anas platyrhynchos ENSAPLG00000002204 I
NFIL3 Anolis carolinensis ENSACAG00000000915 I
Afo_R003629 Aptenodytes forsteri Afo_R003629 I
ENSAMXG00000024924 Astyanax mexicanus ENSAMXG00000024924 I
ENSAMXG00000025528 Astyanax mexicanus ENSAMXG00000025528 I
ENSBTAP00000023618-D1 Bos grunniens ENSBTAP00000023618-D1 I
NFIL3 Bos taurus ENSBTAG00000017763 I
Brh_R002139 Buceros rhinoceros Brh_R002139 I
NFIL3 Callithrix jacchus ENSCJAG00000005728 I
Aan_R012398 Calypte anna Aan_R012398 I
NFIL3 Canis familiaris ENSCAFG00000002169 I
Cmyd_10009373 Chelonia mydas Cmyd_10009373 I
ENSCSAG00000018511 Chlorocebus sabaeus ENSCSAG00000018511 I
NFIL3 Choloepus hoffmanni ENSCHOG00000006006 I
nfil3 Danio rerio ENSDARG00000042977 I
ENSDNOG00000045269 Dasypus novemcinctus ENSDNOG00000045269 I
NFIL3 Felis catus ENSFCAG00000013483 I
ENSFALG00000014613 Ficedula albicollis ENSFALG00000014613 I
ENSGMOG00000008894 Gadus morhua ENSGMOG00000008894 I
NFIL3 Gallus gallus ENSGALG00000015209 I
ENSGACG00000006400 Gasterosteus aculeatus ENSGACG00000006400 I
Gfo_R004089 Geospiza fortis Gfo_R004089 I
NFIL3 Gorilla gorilla ENSGGOG00000001317 I
NFIL3 Homo sapiens ENSG00000165030 D
ENSSTOG00000028188 Ictidomys tridecemlineatus ENSSTOG00000028188 I
ENSLOCG00000018299 Lepisosteus oculatus ENSLOCG00000018299 I
ENSLOCG00000008217 Lepisosteus oculatus ENSLOCG00000008217 I
ENSLAFG00000017043 Loxodonta africana ENSLAFG00000017043 I
ENSP00000297689 Macaca fascicularis ENSP00000297689 I
NFIL3 Macaca mulatta ENSMMUG00000023257 I
NFIL3 Meleagris gallopavo ENSMGAG00000016056 I
NFIL3 Monodelphis domestica ENSMODG00000025436 I
ENSMPUG00000019999 Mustela putorius furo ENSMPUG00000019999 I
Nfil3 Mus musculus ENSMUSG00000056749 D
Myotis_brandtii_NFIL3_10016869 Myotis brandtii Myotis_brandtii_NFIL3_10016869 I
NFIL3 Myotis lucifugus ENSMLUG00000010449 I
ENSNLEG00000018673 Nomascus leucogenys ENSNLEG00000018673 I
Ogr15166 Ophisaurus gracilis Ogr15166 I
ENSONIG00000018891 Oreochromis niloticus ENSONIG00000018891 I
ENSONIG00000021308 Oreochromis niloticus ENSONIG00000021308 I
NFIL3 Oryctolagus cuniculus ENSOCUG00000000145 I
ENSORLG00000016478 Oryzias latipes ENSORLG00000016478 I
NFIL3 Otolemur garnettii ENSOGAG00000011750 I
ENSOARG00000003352 Ovis aries ENSOARG00000003352 I
NFIL3 Pan troglodytes ENSPTRG00000021100 I
ENSPANG00000006675 Papio anubis ENSPANG00000006675 I
ENSPSIG00000011205 Pelodiscus sinensis ENSPSIG00000011205 I
ENSPFOG00000023063 Poecilia formosa ENSPFOG00000023063 I
Pvit_13069 Pogona vitticeps Pvit_13069 I
ENSPPYG00000019368 Pongo abelii ENSPPYG00000019368 I
NFIL3 Pteropus vampyrus ENSPVAG00000004801 I
Nfil3 Rattus norvegicus ENSRNOG00000011668 I
ENSSHAG00000008103 Sarcophilus harrisii ENSSHAG00000008103 I
NFIL3 Sus scrofa ENSSSCG00000009592 I
NFIL3 Taeniopygia guttata ENSTGUG00000000417 I
ENSTNIG00000008333 Tetraodon nigroviridis ENSTNIG00000008333 I
NFIL3 Tupaia belangeri ENSTBEG00000000787 I
NFIL3 Tursiops truncatus ENSTTRG00000014041 I
Tal_R002924 Tyto alba Tal_R002924 I
nfil3.L Xenopus laevis XB-GENE-865288 I
nfil3 Xenopus tropicalis XB-GENE-479624 I
ENSXMAG00000019943 Xiphophorus maculatus ENSXMAG00000019943 I